Abstract. Coral bleaching due to thermal and environmental stress threatens coral reefs and possibly people who rely on their resources. Here we explore patterns of coral bleaching and mortality in East Africa in 1998 and 2005 in a region where the equatorial current and the island effect of Madagascar interact to create different thermal and physicochemical environments. A variety of temperature statistics were calculated, and their relationships with the degree-heating months (DHM), a good predictor of coral bleaching, determined. Changes in coral cover were analyzed from 29 sites that span .1000 km of coastline from Kenya to the Comoros Islands. Temperature patterns are influenced by the island effect, and there are three main temperature environments based on the rise in temperature over 52 years, measures of temperature variation, and DHM. Offshore sites north of Madagascar that included the Comoros had low temperature rises, low DHM, high standard deviations (SD), and the lowest relative coral mortality. Coastal sites in Kenya had moderate temperature rises, the lowest temperature SD, high DHM, and the highest relative coral mortality. Coastal sites in the south had the highest temperature rises, moderate SD and DHM, and low relative coral mortality. Consequently, the rate of temperature rise was less important than background variation, as reflected by SD and kurtosis measures of sea surface water temperature (SST), in predicting coral survival across 1998. Coral bleaching responses to a warm-water anomaly in 2005 were also negatively related to temperature variation, but positively correlated with the speed of water flow. Separating these effects is difficult; however, both factors will be associated with current environments on the opposite sides of reefs and islands. Reefs in current shadows may represent refugia where corals acclimate and adapt to environmental variation, which better prepares them for rising temperature and anomalies, even though these sites are likely to experience the fastest rates of temperature rise. We suggest that these sites are a conservation priority and should be targeted for management and further ecological research in order to understand acclimation, adaptation, and resilience to climate change.

Coral reefs are experiencing increasing anthropogenic impacts that result in substantial declines of reef-building corals and a change of community structure towards other benthic invertebrates or macroalgae. Reefs around Zanzibar are exposed to untreated sewage and runoff from the main city Stonetown. At many of these sites, sponge cover has increased over the last years. Sponges are one of the top spatial competitors on reefs worldwide. Their success is, in part, dependent on their strong chemical defenses against predators, microbial attacks and other sessile benthic competitors. This is the first study that investigates the bioactive properties of sponge species in the Western Indian Ocean region. Crude extracts of the ten most dominant sponge species were assessed for their chemical defenses against 35 bacterial strains (nine known as marine pathogens) using disc diffusion assays and general cytotoxic activities were assessed with brine shrimp lethality assays. The three chemically most active sponge species were additionally tested for their allelopathic properties against the scleractinian coral competitor Porites sp.. The antimicrobial assays revealed that all tested sponge extracts had strong antimicrobial properties and that the majority (80%) of the tested sponges were equally defended against pathogenic and environmental bacterial strains. Additionally, seven out of ten sponge species exhibited cytotoxic activities in the brine shrimp assay. Moreover, we could also show that the three most bioactive sponge species were able to decrease the photosynthetic performance of the coral symbionts and thus were likely to impair the coral physiology.

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The health and functioning of coastal ecosystems around Zanzibar Islands is severely affected by a combination of human and natural pressures. These consists of rapid population growth, uncontrolled tourism, overfishing and destructive fishing practices, harvesting of mangroves, dumping of solid waste and untreated wastewater from urban areas, acting on top of climate change related increases in sea temperatures, and sea levels as well as outbreaks of invasive species. Despite a high financial value of the coastal zone related to tourism, fisheries and seaweed production, documentation of the environmental degradation is scarce and clear environmental targets are missing. Through a combination of baseline studies and a literature review, we give an overview of how human and natural pressures have affected the coastal ecosystem health of Zanzibar. We give examples of how well managed marine protected areas can mitigate degradation of coral reefs, and provide suggestions for steps needed to improve management of coastal marine resources.

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