Living organisms use waves that propagate through excitable media to transport information. Ca2+ waves are a paradigmatic example of this type of processes. A large hierarchy of Ca2+ signals that range from localized release events to global waves has been observed in Xenopus laevis oocytes. In these cells, Ca2+ release occurs trough inositol 1,4,5-trisphosphate receptors (IP3Rs) which are organized in clusters of channels located on the membrane of the endoplasmic reticulum. In this article we construct a stochastic model for a cluster of IP3R 's that replicates the experimental observations reported in [D. Fraiman, Biophys. J. 90, 3897 (2006)]. We then couple this phenomenological cluster model with a reaction-diffusion equation, so as to have a discrete stochastic model for calcium dynamics. The model we propose describes the transition regimes between isolated release and steadily propagating waves as the IP3 concentration is increased.
In this work we present an electronic syrinx: an analogical integrator of the equations describing a model for sound production by oscine birds. The model depends on time varying parameters with clear biological interpretation: the air sac pressure and the tension of ventral syringeal muscles. We test the hypothesis that these physiological parameters can be reconstructed from the song. In order to do so, we built two transducers. The input for these transducers is an acoustic signal. The first transducer generates an electric signal that we use to reconstruct the bronchial pressure. The second transducer allows us to reconstruct the syringeal tension (in both cases, for the time intervals where phonation takes place). By driving the electronic syrinx with the output of the transducers we generate synthetic song. Important qualitative features of the acoustic input signal are reproduced by the synthetic song. These devices are especially useful to carry out altered feedback experiences, and applications as biomimetic resources are discussed.
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