We have sequenced the whole genome of Streptomyces sp. 6(4) isolated from tomato roots that presents antifungal activity against phytopathogenic fungi, mainly Bipolaris sorokiniana. The genome has almost 7 Mb and 3368 hypothetical proteins that were analysed and characterized in Uniprot with the emphasis on biological compounds. Multilocus sequence typing (MLST) analyses were performed in an effort to characterize and identify this isolate, resulting in a new sequence type (ST), classified as ST64. Phenetic and phylogenetic trees were constructed to investigate Streptomyces sp. 6(4) evolution and sequence similarity, and the isolate is a strain closer to Streptomyces prasinus and Streptomyces viridosporus . It is known that the genus Streptomyces possess huge metabolic capacity with the presence of cryptic genes. These genes are usually present in clusters, which are responsible for the production of diverse natural products, mainly antibiotics. In addition, 6(4) showed 11 biosynthetic gene clusters through antiSMASH, including 3 polyketide synthase (PKS) and non-ribosomal peptide synthase (NRPS) type clusters.
We have sequenced the whole genome of Streptomyces sp. 6(4) isolated from tomato roots that presents antifungal activity against phytopathogenic fungi, mainly against Bipolaris sorokiniana . The genome has almost 7 Mb and 3,368 hypothetical proteins that were analyzed and characterized in Uniprot with emphasize in biological compounds. MLST analysis were performed in effort to characterize and identify this isolate, resulting in a new ST, classified as ST64. Phenetic and phylogenetic trees were constructed to investigate Streptomyces sp. 6(4) evolution and sequence similarity, and the isolate is a strain closer to Streptomyces prasinus and Streptomyces viridosporus . It is known that Streptomyces genera comprises a huge metabolism capacity with the presence of cryptic genes. These genes are usually present in clusters who are responsible for production of a high diversity of natural products, mainly antibiotics. In addition, 6(4) showed 11 biosynthetic gene cluster through antiSMASH, including 3 clusters PKS and NRPS type.
We have sequenced the whole genome of Streptomyces sp. 6(4) isolated from tomato roots that presents antifungal activity against phytopathogenic fungi, mainly against Bipolaris sorokiniana . The genome has almost 7 Mb and 3,368 hypothetical proteins that were analyzed and characterized in Uniprot with emphasize in biological compounds. MLST analysis were performed in effort to characterize and identify this isolate, resulting in a new ST, classified as ST64. Phenetic and phylogenetic trees were constructed to investigate Streptomyces sp. 6(4) evolution and sequence similarity, and the isolate is a strain closer to Streptomyces prasinus and Streptomyces viridosporus . It is known that Streptomyces genera comprises a huge metabolism capacity with the presence of cryptic genes. These genes are usually present in clusters who are responsible for production of a high diversity of natural products, mainly antibiotics. In addition, 6(4) showed 11 biosynthetic gene cluster through antiSMASH, including 3 clusters PKS and NRPS type.
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