Domesticated species are impacted in unintended ways during domestication and breeding. Changes in the nature and intensity of selection impart genetic drift, reduce diversity, and increase the frequency of deleterious alleles. Such outcomes constrain our ability to expand the cultivation of crops into environments that differ from those under which domestication occurred. We address this need in chickpea, an important pulse legume, by harnessing the diversity of wild crop relatives. We document an extreme domestication-related genetic bottleneck and decipher the genetic history of wild populations. We provide evidence of ancestral adaptations for seed coat color crypsis, estimate the impact of environment on genetic structure and trait values, and demonstrate variation between wild and cultivated accessions for agronomic properties. A resource of genotyped, association mapping progeny functionally links the wild and cultivated gene pools and is an essential resource chickpea for improvement, while our methods inform collection of other wild crop progenitor species.

Legumes represent the second most important family of crop plants after grasses, accounting for approximately 27% of the world's crop production. Past domestication processes resulted in a high degree of relatedness between modern varieties of crops, leading to a narrower genetic base of cultivated germplasm prone to pests and diseases. Crop wild relatives (CWRs) harbor genetic diversity tested by natural selection in a range of environments. To fully understand and exploit local adaptation in CWR, studies in geographical centers of origin combining ecology, physiology, and genetics are needed. With the advent of modern genomics and computation, combined with systematic phenotyping, it is feasible to revisit wild accessions and landraces and prioritize their use for breeding, providing sources of disease resistances; tolerances of drought, heat, frost, and salinity abiotic stresses; nutrient densities across major and minor elements; and food quality traits. Establishment of hybrid populations with CWRs gives breeders a considerable benefit of a prebreeding tool for identifying and harnessing wild alleles and provides extremely valuable long-term resources. There is a need of further collecting and both ex situ and in situ conservation of CWR diversity of these taxa in the face of habitat loss and degradation and climate change. In this review, we focus on three legume crops domesticated in the Fertile Crescent, pea, chickpea, and lentil, and summarize the current state and potential of their respective CWR taxa for crop improvement.

In tropical regions with well‐defined wet and dry seasons, repeated wetting and drying cycles can harden exposed soils and inhibit root growth. While this phenomenon has been well documented, the relationships between plant productivity and chemical and physical soil parameters have not been well defined. The current study identifies the abiotic parameters that best relate to measures of plant development, specifically to corn productivity. The primary goal of this research was to provide information to improve agricultural sustainability in humid tropical ecosystems. The effects of using plant residues as a cover on a sandy soil were studied. Four leguminous species were planted in an alley cropping system, Leucaena leucocephala, Cajanus cajan, Clitoria fairchildiana and Acacia mangium, and corn was planted in January 2007 between legume rows. We measured the most important chemical and physical soil parameters. Yield indicators included cob weight and the weight of 100 kernels. The application of plant residues altered soil conditions and increased rootable soil volume. This change was associated with an increase by 10% in water retention above field capacity in the uppermost soil layer of the residue‐covered sections of the experiment. In the control sections cobs were up to three times lighter (31.43–93.38 g) in the bare soil control than those from residue‐covered sections of the experiment. Dynamic indicators related to nutrient absorption and crop evapotranspiration, such as the number of days with water stress and rootable soil volume, were the most suitable indicators for assessing soil quality. The response of corn was best related to complex physical indicators, including the amount of N applied via legume residues.

In wild habitats, fruit dehiscence is a critical strategy for seed dispersal; however, in cultivated crops it is one of the major sources of yield loss. Therefore, indehiscence of fruits, pods, etc., was likely to be one of the first traits strongly selected in crop domestication. Even with the historical selection against dehiscence in early domesticates, it is a trait still targeted in many breeding programs, particularly in minor or underutilized crops. Here, we review dehiscence in pulse (grain legume) crops, which are of growing importance as a source of protein in human and livestock diets, and which have received less attention than cereal crops and the model plant Arabidopsis thaliana. We specifically focus on the (i) history of indehiscence in domestication across legumes, (ii) structures and the mechanisms involved in shattering, (iii) the molecular pathways underlying this important trait, (iv) an overview of the extent of crop losses due to shattering, and the effects of environmental factors on shattering, and, (v) efforts to reduce shattering in crops. While our focus is mainly pulse crops, we also included comparisons to crucifers and cereals because there is extensive research on shattering in these taxa.