Early colonization of primary tomato roots, grown in vitro, by Pseudomonas fluorescens A6RI, introduced by seed bacterization, was monitored for 7 days in three different root zones (zone A, apex+elongation+young hairy zone; zone B, hairy zone; zone C, old hairy zone+collar). Bacterial quantification was assessed by enumeration of (i) colony forming units (cfu) after dilution plating and of (ii) total bacterial cells by flow cytometry. Bacterial distribution and organization in the root zones were analyzed by fluorescence, confocal and scanning electron microscopy. For all sampling dates and zones, the densities of total bacterial cells were significantly higher than those of the cfu. The kinetics of cfu densities varied according to the root zone. Their density decreased with time in zone A, while no variation with time was recorded in zones B and C. Densities of total bacterial cells did not show any significant temporal variation for any of the root zones. Microscopic analyses allowed the characterization of the distribution and organizational patterns of the bacterial cells according to time and space. In 3-day-old plants, bacteria were mostly present as single cells and were evenly distributed in the two root zones analyzed (A and B). In 5- and 7-day-old plants, distribution and organization differed according to the root zone. In zone A, only few single cells were observed, whereas zones B and C were mostly covered by cells localized between epidermal root cells and organized in pairs and strings, respectively.

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Polychaetes are usually the most abundant taxon in benthic communities and have been most often utilized as indicator species of environmental conditions. This review finds that, while the use of indicator species for a particular pollutant is not simple, polychaetes can provide a useful means of assessing the effects of poor environmental conditions. Polychaetes may be used as sensitive monitors of water quality especially in terms of the effects of pollutants on life history characteristics. They may also be utilized as general indicators of community diversity but those species indicative of lower diversity may differ geographically and temporally. While sewage is often a mixture of high organic material and other pollutants such as heavy metals and pesticides, high organic situations associated with aquaculture facilities indicates that members of the Capitella capitata species complex and the dorvilleid genus Ophryotrocha are often dominant. Some species of polychaetes are able to live in sediments very high in trace metal content and body burden of these metals often does not reflect sediment concentrations due to regulation by these species. Many species seem relatively resistant to organic contaminants and pesticides and the effects of these pollutants on life history characteristics of these species may provide a more sensitive assay method. Recent studies using biomarkers in polychaetes to indicate general heavy metal or pesticide contamination has shown some success. Polychaete species known to occur in appreciable densities in the Gulf of Nicoya, Costa Rica, and which have been most often used as indicator species of pollution, are listed as potential taxa for environmental monitoring in this tropical estuary. Rev. Biol. Trop. 56 (Suppl. 4): 11-38. Epub 2009 June 30.Key words: polychaete, indicator species, marine pollution, community diversity, heavy metals, pesticides, organics, biomarkers, tropical, Costa Rica.The polychaetes have long been an obvious choice to act as representative species in the analysis of the health of benthic communities as they are usually the most abundant taxon taken in benthic samples, both in terms of the number of species and numerical abundance. Additionally, unlike nektonic or reptant organism, the polychaetes usually live within the sediments or attached to hard surfaces and, while their larvae may be capable of long distance transport, the adults are relatively inert. This relative immobility ensures chronic exposure to any toxic materials in the environment rather than the episodic exposures of a more vagile organism. Any long-term changes in the wellbeing of the benthos should be reflected in the polychaete community .The life history characteristics of polychaetes also make them good candidates to act as indicator species. The epibenthic filter feeders maximize their exposure to any harmful materials within the water column as they process relatively large amounts of water during feeding. Deposit feeding and interstitial species, which are in intimate c...