Rapid collapse of extensive kelp forests and a regime shift to tropicalized temperate reefs followed extreme heatwaves and decades of gradual warming. Abstract:Ecosystem reconfigurations arising from climate driven changes in species distributions are expected to have profound ecological, social and economic implications. Here, we reveal a rapid climate driven regime shift of Australian temperate reef communities, which lost their defining kelp forests and became dominated by persistent seaweed turfs. Following decades of ocean warming, extreme marine heatwaves forced a 100 km range contraction of extensive kelp forests, and saw temperate species replaced by seaweeds, invertebrates, corals and fishes characteristic of subtropical and tropical waters. This community wide tropicalization fundamentally altered key ecological processes, suppressing the recovery of kelp forests. Main Text:Broad scale losses of species which provide the foundations for habitats cause dramatic shifts in ecosystem structure because they support core ecological processes (1-3). Such habitat loss can lead to a regime shift where reinforcing feedback mechanisms intensify to provide resilience to an alternate community configuration, often with profound ecological, social and economic consequences (4-6). Benthic marine regime shifts have been associated with the erosion of ecological resilience through overfishing or eutrophication, altering the balance between consumers and resources, rendering ecosystems vulnerable to major disturbances (1, 2,6,7). Now, climate change is also contributing to the erosion of resilience (8,9), where increasing temperatures are modifying key physiological, demographic and community scale processes (8, 10), driving species redistribution at a global scale and rapidly breaking down long-standing biogeographic boundaries (11,12). These processes culminate in novel ecosystems where tropical and temperate species interact with unknown implications (13). Here we document how a marine heatwave caused the loss of kelp forests across ~2,300 km 2 of Australia's Great Southern Reef, forcing a regime shift to seaweed turfs. We demonstrate a rapid 100 km rangecontraction of kelp forests and a community-wide shift toward tropical species with ecological processes suppressing kelp forest recovery.To document ecosystem changes we surveyed kelp forests, seaweeds, fish, mobile invertebrates and corals at 65 reefs across a ~2,000 km tropical to temperate transition zone in western Australia (14). Surveys were conducted between 2001 to 2015, covering the years before and after an extreme marine heatwave impacted the region.The Indian Ocean adjacent to western Australia is a 'hotspot' where the rate of ocean warming is in the top 10% globally (15), and isotherms are shifting poleward at a rate of 20 -50 km per decade (16). Until recently, kelp forests were dominant along >800 km of the west coast (8), covering 2,266 km 2 of rocky reefs between 0 -30 m depth south of 27.7°S (Fig. 1). Kelp forests along the midwest section of this ...

In subtropical ocean gyres, anticyclonic eddies increase surface nutrient injection and primary production during winter.

Gridded SST products developed particularly for offshore regions are increasingly being applied close to the coast for biogeographical applications. The purpose of this paper is to demonstrate the dangers of doing so through a comparison of reprocessed MODIS Terra and Pathfinder v5.2 SSTs, both at 4 km resolution, with instrumental in situ temperatures taken within 400 m from the coast. We report large biases of up to +6°C in places between satellite-derived and in situ climatological temperatures for 87 sites spanning the entire ca. 2 700 km of the South African coastline. Although biases are predominantly warm (i.e. the satellite SSTs being higher), smaller or even cold biases also appear in places, especially along the southern and western coasts of the country. We also demonstrate the presence of gradients in temperature biases along shore-normal transects — generally SSTs extracted close to the shore demonstrate a smaller bias with respect to the in situ temperatures. Contributing towards the magnitude of the biases are factors such as SST data source, proximity to the shore, the presence/absence of upwelling cells or coastal embayments. Despite the generally large biases, from a biogeographical perspective, species distribution retains a correlative relationship with underlying spatial patterns in SST, but in order to arrive at a causal understanding of the determinants of biogeographical patterns we suggest that in shallow, inshore marine habitats, temperature is best measured directly.

A unique feature of the subtropical South Indian Ocean is the existence of anticyclonic eddies that have higher chlorophyll concentrations than cyclonic eddies. Off Western Australia, this anomalous behavior is related to the seeding of anticyclonic eddies with shelf water enriched in phytoplankton biomass and nutrients. Further off-shore, two mechanisms have been suggested to explain the eddy/chlorophyll relationship: (i) eddies originating from the Australian coast maintain their chlorophyll anomaly while propagating westward; and (ii) eddy-induced Ekman upwelling (downwelling) enhances (dampens) nutrient supply in anticyclonic (cyclonic) eddies. Here we describe the relationship between eddies and surface chlorophyll within the South Indian Ocean, and discuss possible mechanisms to explain the anomalous behavior in light of new analyses performed using satellite chlorophyll data. We show that anticyclonic eddies exhibit higher surface chlorophyll concentration than cyclonic eddies across the entire South Indian Ocean basin (from 20 to 28 S), particularly in winter. Using Self Organizing Maps we analyze the chlorophyll patterns within anticyclonic eddies and cyclonic eddies and highlight their complexity. Our analysis suggests that multiple mechanisms may underlie the observed eddy/chlorophyll relationship. Based on Argo float data, we postulate the relationship may be partly related to seasonal adjustment of the mixed layer depth within eddies. Deeper mixing in anticyclonic eddies is expected to enhance nutrient supply to the mixed layer, while shallower mixing in cyclonic eddies is expected to reduce it. This could explain why the observed winter surface chlorophyll bloom is stronger in anticyclonic eddies than in cyclonic eddies.

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