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BackgroundWhen a large number of alleles are lost from a population, increases in individual homozygosity may reduce individual fitness through inbreeding depression. Modest losses of allelic diversity may also negatively impact long-term population viability by reducing the capacity of populations to adapt to altered environments. However, it is not clear how much genetic diversity within populations may be lost before populations are put at significant risk. Development of tools to evaluate this relationship would be a valuable contribution to conservation biology. To address these issues, we have created an experimental system that uses laboratory populations of an estuarine crustacean, Americamysis bahia with experimentally manipulated levels of genetic diversity. We created replicate cultures with five distinct levels of genetic diversity and monitored them for 16 weeks in both permissive (ambient seawater) and stressful conditions (diluted seawater). The relationship between molecular genetic diversity at presumptive neutral loci and population vulnerability was assessed by AFLP analysis.ResultsPopulations with very low genetic diversity demonstrated reduced fitness relative to high diversity populations even under permissive conditions. Population performance decreased in the stressful environment for all levels of genetic diversity relative to performance in the permissive environment. Twenty percent of the lowest diversity populations went extinct before the end of the study in permissive conditions, whereas 73% of the low diversity lines went extinct in the stressful environment. All high genetic diversity populations persisted for the duration of the study, although population sizes and reproduction were reduced under stressful environmental conditions. Levels of fitness varied more among replicate low diversity populations than among replicate populations with high genetic diversity. There was a significant correlation between AFLP diversity and population fitness overall; however, AFLP markers performed poorly at detecting modest but consequential losses of genetic diversity. High diversity lines in the stressful environment showed some evidence of relative improvement as the experiment progressed while the low diversity lines did not.ConclusionsThe combined effects of reduced average fitness and increased variability contributed to increased extinction rates for very low diversity populations. More modest losses of genetic diversity resulted in measurable decreases in population fitness; AFLP markers did not always detect these losses. However when AFLP markers indicated lost genetic diversity, these losses were associated with reduced population fitness.

Coastal ecosystems are inherently complex and potentially adaptive as they respond to changes in nutrient loads and climate. We documented the role that carbon stable isotope (δ 13 C) measurements could play in understanding that adaptation with a series of three Ecostat (i.e., continuous culture) experiments. We quantified linkages among δ 13 C, nutrients, carbonate chemistry, primary, and secondary production in temperate estuarine waters. Experimental culture vessels (9.1 L) containing 33% whole and 67% filtered (0.2 µm) seawater were amended with dissolved inorganic nitrogen (N) and phosphorous (P) in low (3 vessels; 5 µM N, 0.3 µM P), moderate (3 vessels; 25 µM N, 1.6 µM P), and high amounts (3 vessels; 50 µM N, 3.1 µM P). The parameters necessary to calculate carbonate chemistry, chlorophyll-a concentrations, and particulate δ 13 C values were measured throughout the 14 day experiments. Outflow lines from the experimental vessels fed 250 ml containers seeded with juvenile blue mussels (Mytilus edulis). Mussel subsamples were harvested on days 0, 7, and 14 and their tissues were analyzed for δ 13 C values. We consistently observed that particulate δ 13 C values were positively correlated with chlorophyll-a, carbonate chemistry, and to changes in the ratio of bicarbonate to dissolved carbon dioxide (HCO − 3 :CO 2 ). While the relative proportion of HCO − 3 to CO 2 increased over the 14 days, concentrations of each declined, reflecting the drawdown of carbon associated with enhanced production. Plankton δ 13 C values, like chlorophyll-a concentrations, increased over the course of each experiment, with the greatest increases in the moderate and high treatments. Trends in δ 13 C over time were also observed in the mussel tissues. Despite ecological variability and different plankton abundances the experiments consistently demonstrated how δ 13 C values in primary producers and consumers reflected nutrient availability, via its impact on carbonate chemistry. We applied a series of mixed-effects models to observational data from Narragansett Bay and the model that included in situ δ 13 C and percent organic matter was the best predictor of . In temperate, plankton-dominated estuaries, δ 13 C values in plankton and filter feeders reflect net productivity and are a valuable tool to understand the production conditions under which the base of the food chain was formed.

ABSTRACT. New England coastal and adjacent Nova Scotia shelfwaters have a reduced buffering capacity because of significant freshwater input, making the region's waters potentially more vulnerable to coastal acidification. Nutrient loading and heavy precipitation events further acidify the region's poorly buffered coastal waters. Despite the apparent vulnerability of these waters, and fisheries' and mariculture's significant dependence on calcifying species, the community lacks the ability to confidently predict how the region's ecosystems will respond to continued ocean and coastal acidification. Here, we discuss ocean and coastal acidification processes specific to New England coastal and Nova Scotia shelf waters and review current understanding of the biological consequences most relevant to the region. We also identify key research and monitoring needs to be addressed and highlight existing capacities that should be leveraged to advance a regional understanding of ocean and coastal acidification.