For more information on the USGS-the Federal source for science about the Earth, its natural and living resources, natural hazards, and the environment-visit https://www.usgs.gov or call 1-888-ASK-USGS (1-888-275-8747).For an overview of USGS information products, including maps, imagery, and publications, visit https://store.usgs.gov.The findings and conclusions in this article are those of the author(s) and do not necessarily represent the views of the U.S. Fish and Wildlife Service.Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.Although this information product, for the most part, is in the public domain, it also may contain copyrighted materials as noted in the text. Permission to reproduce copyrighted items must be secured from the copyright owner. Abstract Detecting populations of rare or cryptic species is essential for their conservation. For species like giant gartersnakes (Thamnophis gigas), conventional survey methods can be expensive and inefficient. These sampling difficulties might be overcome by modern techniques that detect deoxyribonucleic acid (DNA) shed by organisms into the environment (eDNA). We evaluated the efficacy of detecting giant gartersnake eDNA in water samples from the laboratory and at locations with known giant gartersnake populations in the Sacramento Valley of California, and failed to detect giant gartersnake DNA in most laboratory and all field samples. Aspects of giant gartersnake biology-such as highly keratinized skin and spending extensive time in the terrestrial environment, as well as hot, sunny, and turbid conditions in wetlands and canals of the Sacramento Valley-likely contributed to low detection probabilities. Although detection of eDNA shows promise under many conditions, further development is needed before sampling for eDNA is a viable option for detecting giant gartersnake populations.

Demographic models provide insight into which vital rates and life stages contribute most to population growth. Integral projection models (IPMs) offer flexibility in matching model structure to a species’ demography. For many rare species, data are lacking for key vital rates, and uncertainty might dissuade researchers from attempting to build a demographic model. We present work that highlights how the implications of uncertainties and unknowns can be explored by building and analyzing alternative models. We constructed IPMs for the threatened giant gartersnake (Thamnophis gigas) based on published studies to determine where management efforts could be targeted to have the greatest effect on population persistence and what unknowns remain for future research. Given uncertainty in the survival of snakes during their first year, and in the form of the size‐survival relationship, we modeled a range of scenarios and evaluated where models agree about factors influencing population growth and where discrepancies exist. For most scenarios, the survival of large adult females had the greatest influence on population growth, but the relative importance of juvenile versus adult somatic growth for population growth was dependent on the recruitment probability and the shape of the size‐survival function. More data on temporal variation and covariance among vital rates would improve stochastic models for the giant gartersnake. This paper demonstrates the effectiveness of IPMs for studying the demography of reptiles and the value of the model‐building process for formalizing what is known and unknown about the demography of rare species. Published 2019. This article is a U.S. Government work and is in the public domain in the USA.

The introduction of exotic species into an environment can introduce great change in the trophic dynamics of native species. This is of even greater concern if the native species is of conservation concern. The giant gartersnake, Thamnophis gigas, an endemic predator of the Central Valley of California and a species of conservation concern at the state and federal levels, has declined as a result of conversion of its once vast wetland habitat to agriculture. Another anthropogenic factor contributing to this snake's changing ecology is the introduction of nonnative prey into the species' habitats. These introductions have resulted in a prey community that is almost completely composed of exotic species and have potential for considerable effects. In order to assess prey preference and selection we performed three sets of behavioral trials on naïve neonates. We examined 1) neonate prey preference in response to olfactory cues of prepared prey extracts, 2) neonate consumption of different live prey items presented simultaneously; and 3) terrestrial feeding behavior and/or latency to successful attack. Results from the olfactory study suggest that native Sierran treefrogs, Pseudacris sierra, are preferred by neonates. Results from consumption trials suggest that neonates are more likely to select frog species than fish species. This is the first study that we are aware of that examines prey selection of this threatened species and serves to inform its conservation and management.

For more information on the USGS-the Federal source for science about the Earth, its natural and living resources, natural hazards, and the environment-visit https://www.usgs.gov/ or call 1-888-ASK-USGS (1-888-275-8747).For an overview of USGS information products, including maps, imagery, and publications, visit https:/store.usgs.gov.Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.Although this information product, for the most part, is in the public domain, it also may contain copyrighted materials as noted in the text. Permission to reproduce copyrighted items must be secured from the copyright owner.Suggested citation: Reyes, G.A., Halstead, B.J., Rose, J.P., Ersan, J.S.M., Jordan, A.C., Essert, A.M., Fouts, K.J., Fulton, A.M., Gustafson, K.B., Wack, R.F., Wylie, G.D., and Casazza, M.L., 2017, Behavioral response of giant gartersnakes (Thamnophis gigas) to the relative availability of aquatic habitat on the landscape: U.S. Geological Survey OpenFile Report 2017-1141, 134 p., https://doi.org/10.3133/ofr20171141. ISSN 2331ISSN -1258 Table 8. Probability of giant gartersnakes (Thamnophis gigas) moving more than 100 meters, based on proportion of rice within 100 meters of the snake's location, and a third order polynomial of Julian date ......... 28 Table 9. Regression coefficient estimates for average movement rates (log meters per day) of giant gartersnakes (Thamnophis gigas), based on proportion of rice within 100 meters of the snake's location, AbstractMost extant giant gartersnake (Thamnophis gigas) populations persist in an agro-ecosystem dominated by rice, which serves as a surrogate to the expansive marshes lost to flood control projects and development of the Great Central Valley of California. Knowledge of how giant gartersnakes use the rice agricultural landscape, including how they respond to fallowing, idling, or crop rotations, would greatly benefit conservation of giant gartersnakes by informing more snake-friendly land and water management practices. We studied adult giant gartersnakes at 11 sites in the rice-growing regions of the Sacramento Valley during an extended drought in California to evaluate their response to differences in water availability at the site and individual levels. Although our study indicated that giant gartersnakes make little use of rice fields themselves, and avoid cultivated rice relative to its availability on the landscape, rice is a crucial component of the modern landscape for giant gartersnakes. Giant gartersnakes are strongly associated with the canals that supply water to and drain water from rice fields; these canals provide much more stable habitat than rice fields because they maintain water longer and support marsh-like conditions for most of the giant gartersnake active season. Nonetheless, our results suggest that maintaining canals without neighboring rice fields would be detrimental to giant gartersnake populations, with decreases in giant gartersnake survival rates ass...

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