Premise A novel set of nuclear microsatellite markers was developed and characterized for Campomanesia adamantium (Myrtaceae) and tested for cross‐amplification in the related species C. sessiliflora. Methods and Results Forty‐one primer pairs were designed for simple sequence repeat loci, of which 36 successfully amplified and were polymorphic. The number of alleles ranged from two to 14, with an average of 8.14 alleles per locus. Additionally, cross‐amplification was tested in C. sessiliflora; more than 55.5% of the microsatellite loci amplified, confirming the use of these microsatellite markers in a related species. Conclusions We developed a set of microsatellite markers that will be useful for future studies of genetic diversity and population structure of C. adamantium and a closely related species, which will aid in future conservation efforts.
(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck.
Brazil has several breeds of sheep, including animals that developed from breeds brought by settlers soon after their discovery. Over the years, these animals were under the process of natural selection, resulting in breeds that are considered naturalized. The Pantaneiro sheep shows rusticity and ability of adaptation to tropical climate regions and tolerance or resistance to disease and parasites. Molecular tools have marked the discovery of the origin and domestication processes of a wide variety of species, using both nuclear and mitochondrial molecular markers. These tools have aided in the understanding of evolutionary relationships, taxonomies, and demographics of various species and provided support to identify the most important areas for conservation programs, in addition to assisting in the analysis of genetic diversity in domestic, wildlife and endangered species. Researches using these tools show the importance of exploiting the potential of the genetic diversity found in locally adapted livestock. So far, a few studies were performed to observe that Pantaneiro sheep served as maternal basis for the origin of other breeds reared. Moreover, it is possible to suggest an European origin for the sheep populations studied; therefore, more studies using more markers are needed, so that it is possible to prove their origin.
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