Unraveling the genetic diversity held in genebanks on a large scale is underway, due to advances in Next-generation sequence (NGS) based technologies that produce high-density genetic markers for a large number of samples at low cost. Genebank users should be in a position to identify and select germplasm from the global genepool based on a combination of passport, genotypic and phenotypic data. To facilitate this, a new generation of information systems is being designed to efficiently handle data and link it with other external resources such as genome or breeding databases. The Musa Germplasm Information System (MGIS), the database for global ex situ-held banana genetic resources, has been developed to address those needs in a user-friendly way. In developing MGIS, we selected a generic database schema (Chado), the robust content management system Drupal for the user interface, and Tripal, a set of Drupal modules which links the Chado schema to Drupal. MGIS allows germplasm collection examination, accession browsing, advanced search functions, and germplasm orders. Additionally, we developed unique graphical interfaces to compare accessions and to explore them based on their taxonomic information. Accession-based data has been enriched with publications, genotyping studies and associated genotyping datasets reporting on germplasm use. Finally, an interoperability layer has been implemented to facilitate the link with complementary databases like the Banana Genome Hub and the MusaBase breeding database. Database URL: https://www.crop-diversity.org/mgis/

The yield response of four popular banana cultivars from southeast Asia to infection with a population of Radopholus similis collected from banana in Davao, Philippines, was investigated in a microplot experiment. Bunch weight reduction of nematodeinfected plants ranged from 25 to 68% for all four southeast Asian banana cultivars and Grand Nain (AAA), the susceptible reference cultivar included in the study. The banana cv. Latundan (AAB) had a nematode population density of 185, 38 and 27 nematodes at 6 months after planting, ñowering and harvesting, respectively, and a low bunch weight reduction (25%) compared with the other banana cultivars examined, possibly suggesting that this cultivar is partially resistant to R. similis.

Abstract. Abacá mosaic virus (AbaMV) is related to members of the sugarcane mosaic virus subgroup of the genus Potyvirus. The ∼2 kb 3 terminal region of the viral genome was sequenced and, in all areas analysed, found to be most similar to Sugarcane mosaic virus (SCMV) and distinct from Johnsongrass mosaic virus (JGMV), Maize dwarf mosaic virus (MDMV) and Sorghum mosaic virus (SrMV). Cladograms of the 3 terminal region of the NIb protein, the coat protein core and the 3 untranslated region showed that AbaMV clustered with SCMV, which was a distinct clade and separate from JGMV, MDMV and SrMV. The N-terminal region of the AbaMV coat protein had a unique amino acid repeat motif different from those previously published for other strains of SCMV. The first experimental transmission of AbaMV from abacá (Musa textilis) to banana (Musa sp.), using the aphid vectors Rhopalosiphum maidis and Aphis gossypii, is reported. Polyclonal antisera for the detection of AbaMV in western blot assays and ELISA were prepared from recombinant coat protein expressed in E. coli. A reverse transcriptase PCR diagnostic assay, with microtitre plate colourimetric detection, was developed to discriminate between AbaMV and Banana bract mosaic virus, another Musa-infecting potyvirus. Sequence data, host reactions and serological relationships indicate that AbaMV should be considered a distinct strain of SCMV, and the strain designation SCMV-Ab is suggested.

The in vitro reproductive fitness on carrot discs and the in vivo pathogenicity on selected FHIA (Fundacio´n Honduren˜a de Investigacio´nes Agrı´cola) banana hybrids of a population of Radopholus similis isolated from banana in Davao, Philippines, were investigated at the Bureau of Plant Industry, Davao City, Philippines. It was shown that on carrot discs following inoculation with 25 females, the Davao population had the highest population density and multiplication rate compared with two other R. similis populations from the Philippines (Los Ban˜os and Quezon) and two exotic populations of R. similis (from Uganda and Indonesia). According to the Gompertz model, the Davao population also had a short lag phase and a high maximum specific growth. Following inoculation with one single female, the Davao population also had the highest multiplication rate and the highest proportion of juveniles and females compared with the other four populations included in the experiments. Nine weeks after inoculation with 1000 vermiforms, the R. similis population from Davao had reduced the plant height of the FHIA hybrids included in the experiment (FHIA-3, FHIA-4, FHIA-5, FHIA-18 and FHIA-23) on average by 37%, plant girth by 5.3-40.9%, shoot weight by 20.1-65.8% and root weight by 31.7-69.7%, indicating the high pathogenicity of this population on banana. FHIA-4 was tolerant to R. similis infection.

No abstract