Interaction forces between single strands of DNA were measured with the atomic force microscope by a procedure in which DNA oligonucleotides were covalently attached to a spherical probe and surface. Adhesive forces measured between complementary 20-base strands fell into three distinct distributions centered at 1.52, 1.11, and 0.83 nano-newtons, which are associated with the rupture of the interchain interaction between a single pair of molecules involving 20, 16, and 12 base pairs, respectively. When a third long DNA molecule was coupled between complementary surfaces, both intra- and interchain forces were observed. The intrachain interaction resulting from the molecule's elasticity manifested itself as a long-range cohesive force.

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The covalent attachment of thiol-modified DNA oligomers; to self-assembled monolayer silane films on fused silica and oxidized silicon substrates is described. A heterobifunctional crosslinking molecule bearing both thiol- and amino-reactive moieties was used to tether a DNA oligomer (modified at its terminus with a thiol group) to an aminosilane film formed on silica surfaces. A variety of aminosilanes, crosslinkers and treatment conditions have been tested to identify optimal conditions for DNA immobilization using this approach. The DNA films which result have been characterized using UV spectroscopy, water contact angle measurement, radiolabeling and hybridization methods.

Mixed distearoylphosphatidylethanolamine (DSPE) and dioleoylphosphatidylethanolamine (DOPE) monolayers and bilayers have been deposited on mica using the Langmuir-Blodgett (LB) technique, as a model system for biomembranes. Investigation with atomic force microscopy revealed phase-separation for both monolayers in air and bilayers in water in the form of microscopic DSPE domains embedded in a DOPE matrix. For the monolayers in air, the step height measured between the higher DSPE phase and the lower DOPE phase was larger than expected from the molecular lengths, and a significant contrast in adhesion and friction was observed despite identical lipid end groups. This unexpected behavior resulted primarily from a difference in the film mechanical properties, the DOPE phase being inelastically deformed by the probe. For the bilayers in water, similar trends were found in terms of height, adhesion, and friction, but an additional short-range repulsive hydration/steric force over the DSPE phase contributed to the observed differences.