Background: Unlike the ␣-helix/-strand, the non-regular region contains amino acid defined as disordered residue (DR); its effect on enzyme structure and function is elusive. Results: Terminal DR deletions significantly increased xylanase thermostability and activity. Conclusion: Terminal DRs disturb xylanase thermostability and activity. Significance: DR deletion increased regular secondary structural content, and hence, led to slow decreased ⌬G 0 in the thermal denaturation process, and ultimately, enhanced enzyme thermostability.
The Aspergillus niger xylanase (Xyn) was used as a model to investigate impacts of un-structured residues on GH11 family enzyme, because the β-jelly roll structure has five residues (Ser1Ala2Gly3Ile4Asn5) at N-terminus and two residues (Ser183Ser184) at C-terminus that do not form to helix or strand. The N- or/and C-terminal residues were respectively deleted to construct three mutants. The optimal temperatures of XynΔN, XynΔC, and XynΔNC were 46, 50, and 46°C, and the thermostabilities were 15.7, 73.9, 15.5 min at 50°C, respectively, compared to 48°C and 33.9 min for the Xyn. After kinetic analysis, the substrate-binding affinities for birch-wood xylan decreased in the order XynΔC>Xyn>XynΔNC>XynΔN, while the Kcat values increased in the order XynΔC
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