As the global demand for the carrageenophyte Kappaphycus is steadily increasing, its overall productivity, carrageenan quality, and disease resistance are gradually declining. In the face of this dilemma, wild Kappaphycus populations are viewed as sources of new cultivars that could potentially enhance production; therefore, assessment of their diversity is crucial. This study highlights the morphological and genetic diversity of wild Kappaphycus species obtained from two sites in the Philippines. Nucleotide alignments of available 5′ region of the mitochondrial cytochrome c oxidase subunit I (COI-5P) and cox2-3 spacer sequences of Kappaphycus confirmed the presence of K. alvarezii in Guiuan, Eastern Samar and K. striatus in Bolinao, Pangasinan. Based on the concatenated sequences of the COI-5P and the cox2-3 spacer, nine novel haplotypes were observed along with other published haplotypes. However, there was no relationship between haplotype and morphology. These newly recognized haplotypes indicate a reservoir of unutilized wild genotypes in the Philippines, which could be taken advantage of in developing new cultivars with superior traits. DNA barcodes generated from this study effectively expand the existing databank of Kappaphycus sequences and can provide insights in elucidating the genetic diversity of Kappaphycus species in the country.

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The declining production of commercially important eucheumatoids related to serious problems, like increasing susceptibility to ice–ice disease and epiphytism, may be ameliorated by nutrition. This ushered an increasing interest in incorporating seaweeds into an integrated multi‐trophic aquaculture (IMTA) setup to take up excess inorganic nutrients produced by fish farms for their nourishment. In this regard, it is important to understand the nutrient uptake capacity of candidate seaweeds for incorporation into an IMTA system. Here, we examined the growth, nitrate (NO3‐) uptake kinetics, and biofiltration potential of Eucheuma denticulatum and three strains of Kappaphycus alvarezii (G‐O2, TR‐C16, and SW‐13) with distinct thallus morphologies. The NO3‐ uptake rates of the samples were determined under a range of NO3‐ concentrations (1–48 µM) and uptake rates were fitted to the Michaelis–Menten saturation equation. Among the examined eucheumatoids, only SW‐13 had a linear response to NO3‐ concentration while other strains had uptake rates that followed the Michaelis–Menten saturation equation. Eucheuma denticulatum had the lowest Km (9.78 ± 1.48 µM) while G‐O2 had the highest Vmax (307 ± 79.3 µmol · g−1 · min−1). The efficiency in NO3‐ uptake (highest Vmax/Km and α) was translated into the highest growth rate (3.41 ± 0.58% · d−1) measured in E. denticulatum. Our study provided evidence that eucheumatoids could potentially take up large amount of NO3‐ and fix CO2 when cultivated proximate to a fish farm as one component of an IMTA system. During a 45 ‐d cultivation period of eucheumatoids, as much as 370 g NO3‐ can be sequestered by every 1 kg initial biomass of E. denticulatum growing at 3% · d−1. Furthermore, based on our unpublished photosynthetic measurements, the congeneric K. striatus can fix 27.5  g C · kg−1 DW during a 12 h daylight period.

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Collectively known as eucheumatoids, Eucheuma denticulatum, Kappaphycus alvarezii, K. malesianus, and K. striatus are the main farmed seaweed species in the Philippines. The success of seaweed farming for over five decades in the country is due, in part, to the high diversity of cultivars maintained by the Filipino farmers. Notwithstanding the fact that many eucheumatoid cultivars are presently (and consistently) recognized by the Filipino farmers, there has been no attempt to summarize the current state of the local traditional knowledge about the diversity of this seaweed group, especially with reference to the taxonomy, cultivar designation and distribution. Factors based on present day local knowledge on the eucheumatoid cultivars and what is known on genetic identification in the Philippines were also discussed. A total of 66 cultivars recognized across 58 provinces in the Philippines were documented. Most of these cultivars were morphologically identified as either K. alvarezii or K. striatus, however, the majority were yet to be genetically identified. In part, due to higher demand of kappa-carrageenan extract as compared from the iota type, K. alvarezii and K. striatus were widely cultivated in the Philippines than that of E. denticulatum. Only in the southern Philippines that K. malesianus is currently cultivated. The diverse cultivars identified in this study suggest that the Filipino farmers possess important traditional knowledge that can be useful for future crop selection and breeding.