It is well-known that Amazon tropical forest soils contain high microbial biodiversity. However, anthropogenic actions of slash and burn, mainly for pasture establishment, induce profound changes in the well-balanced biogeochemical cycles. After a few years the grass yield usually declines, the pasture is abandoned and is transformed into a secondary vegetation called "capoeira" or fallow. The aim of this study was to examine how the clearing of Amazon rainforest for pasture affects: (1) the diversity of the Bacteria domain evaluated by Polymerase Chain Reaction and Denaturing Gradient Gel Electrophoresis (PCR-DGGE), (2) microbial biomass and some soil chemical properties (pH, moisture, P, K, Ca, Mg, Al, H + Al, and BS), and (3) the influence of environmental variables on the genetic structure of bacterial community. In the pasture soil, total carbon (C) was between 30 to 42 % higher than in the fallow, and almost 47 % higher than in the forest soil over a year. The same pattern was observed for N. Microbial biomass in the pasture was about 38 and 26 % higher than at fallow and forest sites, respectively, in the rainy season. DGGE profiling revealed a lower number of bands per area in the dry season, but differences in the structure of bacterial communities among sites were better defined than in the wet season. The bacterial DNA fingerprints in the forest were stronger related to Al content and the Cmic:Ctot and Nmic:Ntot ratios. For pasture and fallow sites, the structure of the Bacteria domain was more associated with pH, sum of bases, moisture, total C and N and the microbial biomass. In general microbial biomass in the soils was influenced by total C and N, which were associated with the Bacteria domain, since the bacterial community is a component and active fraction of the microbial biomass. Results show that the genetic composition of bacterial communities in Amazonian soils changed along the sequence forest-pasture-fallow.

The results show that the Amazon soil is an ecosystem susceptible to environmental changes in regarding the fungi community inhabiting this niche.

RESUMOAs micorrizas arbusculares (MAs) são associações simbióticas mutualistas entre fungos do filo Glomeromycota e a maioria das plantas terrestres. A formação e o funcionamento das MAs depende de um complexo processo de troca de sinais, que resulta em mudanças no metabolismo dos simbiontes e na diferenciação de uma interface simbiótica no interior das células das raízes. Os mecanismos que regulam a formação das MAs são pouco conhecidos, mas sabe-se que a concentração de fosfato (P) na planta é um fator determinante para o desenvolvimento da simbiose. A disponibilidade de P na planta pode afetar o balanço de açúcares e de fitormônios (FHs), além da expressão de genes de defesa vegetal. Com o advento da genômica e proteômica, vários genes essenciais para o desenvolvimento das MAs já foram identificados e seus mecanismos de regulação estão sendo estudados. Até o presente, sabe-se que as plantas secretam substâncias que estimulam a germinação de esporos e o crescimento de fungos micorrízicos arbusculares (FMAs). Há evidências também de que os FMAs sintetizam moléculas sinalizadoras, que são reconhecidas pelas plantas hospedeiras. Pelo menos três genes são essenciais para o reconhecimento dessa molécula e a transdução do sinal molecular. Discutem-se os papéis desses genes e os possíveis mecanismos que regulam sua expressão, bem como os papéis dos FHs na regulação de MAs são discutidos.Termos de indexação: micorriza arbuscular, sinalização, fitormônios, genes de defesa, fosfato.(1) Recebido para publicação em junho de 2008 e aprovado em novembro de 2008.

No abstract

Sugarcane (Saccharum spp.) is grown on over 8 million ha in Brazil and is used to produce ethanol and sugar. Some sugarcane fields are burned to facilitate harvesting, which can affect the soil microbial community. However, whether sugarcane pre-harvest burning affects the community of arbuscular mycorrhizal fungi (AMF) and symbioses development is not known. In this study, we investigated the early impacts of harvest management on AMF spore communities and root colonization in three sugarcane varieties, under two harvest management systems (no-burning and pre-harvest burning). Soil and root samples were collected in the field after the first harvest of sugarcane varieties SP813250, SP801842, and RB72454, and AMF species were identified based on spore morphology. Diversity indices were determined based on spore populations and root colonization determined as an indicator of symbioses development. Based on the diversity indices, spore number and species occurrence in soil, no significant differences were observed among the AMF communities, regardless of harvest management type, sugarcane variety or interactions between harvest management type and sugarcane variety. However, mycorrhiza development was stimulated in sugarcane under the no-burning management system. Our data suggest that the sugarcane harvest management system may cause early changes in arbuscular mycorrhiza development.