Adults of most marine benthic and demersal fish are site-attached, with the dispersal of their larval stages ensuring connectivity among populations. In this study we aimed to infer spatial and temporal variation in population connectivity and dispersal of a marine fish species, using genetic tools and comparing these with oceanographic transport. We focused on an intertidal rocky reef fish species, the shore clingfish Lepadogaster lepadogaster, along the southwest Iberian Peninsula, in 2011 and 2012. We predicted high levels of self-recruitment and distinct populations, due to short pelagic larval duration and because all its developmental stages have previously been found near adult habitats. Genetic analyses based on microsatellites countered our prediction and a biophysical dispersal model showed that oceanographic transport was a good explanation for the patterns observed. Adult sub-populations separated by up to 300 km of coastline displayed no genetic differentiation, revealing a single connected population with larvae potentially dispersing long distances over hundreds of km. Despite this, parentage analysis performed on recruits from one focal site within the Marine Park of Arrábida (Portugal), revealed self-recruitment levels of 2.5% and 7.7% in 2011 and 2012, respectively, suggesting that both long- and short-distance dispersal play an important role in the replenishment of these populations. Population differentiation and patterns of dispersal, which were highly variable between years, could be linked to the variability inherent in local oceanographic processes. Overall, our measures of connectivity based on genetic and oceanographic data highlight the relevance of long-distance dispersal in determining the degree of connectivity, even in species with short pelagic larval durations.

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Atlantic horse mackerel (Trachurus trachurus, Linnaeus, 1758) is a highly exploited species, common throughout the North‐East Atlantic. As a pelagic‐neritic fish it typically occurs over the shelf from the surface to 200 m deep on sandy bottoms. Most research has focused on distributions of adults or early life stages (eggs and larvae) of this species in offshore waters and only a few studies have reported the occurrence of early stages near the coast. However, these nearshore environments might be important for the early growth and survival of the Atlantic horse mackerel. In addition, little is known on how environmental processes might affect the early stages of this species. Here, we monitored weekly recruitment of horse mackerel to artificial substrates (SMURFS) deployed near the coast at both the surface and near the bottom, and back‐calculated hatching cohorts. The relationship of both recruitment and hatching patterns with environmental factors was investigated. From a total of 2,515 fish, 2,490 (99%) recruited to surface SMURFS. A GAM and GAMM analysis of the recruitment and hatching patterns, respectively, revealed a strong relationship with the lunar cycle and upwelling. Both recruitment and hatching showed lunar periodicity, with peaks near the new moon and revealed to be influenced negatively by upwelling. This study suggests that the nearshore environment might be an important nursery area for post‐larval and early juvenile Atlantic horse mackerel.