Knowledge of X-ray diffraction in macromolecular crystals is important for not only structural analysis of proteins but also diffraction physics. Dynamical diffraction provides evidence of perfect crystals. Until now, clear dynamical diffraction in protein crystals has only been observed in glucose isomerase crystals. We wondered whether there were other protein crystals with high quality that exhibit dynamical diffraction. Here we report the observation of dynamical diffraction in thin ferritin crystals by rocking-curve measurement and imaging techniques such as X-ray topography. It is generally known that in the case of thin crystals it is difficult to distinguish whether dynamical diffraction occurs from only rocking-curve profiles. Therefore, our results clarified that dynamical diffraction occurs in thin protein crystals because fringe contrasts similar to Pendellösung fringes were clearly observed in the X-ray topographic images. For macromolecular crystallography, it is hard to obtain large crystals because they are difficult to crystallize. For thin crystals, dynamical diffraction can be demonstrated by analysis of the equal-thickness fringes observed by X-ray topography.
X-ray topography is a useful and nondestructive method for direct observation of crystal defects in nearly perfect single crystals. The grown-in dislocations from the cross-linked seed crystal in tetragonal hen egg-white lysozyme crystals were successfully characterized by digital X-ray topography. Digital X-ray topographs with various reflections were easily obtained by reconstruction of sequential rocking-curve images. The Burgers vector of the dislocation is different from those reported previously. Interestingly, one of the dislocations had a bent shape. The preferred direction of the dislocation line was analysed by the estimated dislocation energy based on the dislocation theory. The dislocation energy can be estimated by the dislocation theory even in protein crystals composed of macromolecules.
Significance
Growing high-quality protein crystals is a prerequisite for the structure analysis of proteins by X-ray diffraction. However, dislocation-free perfect protein crystals such as silicon and diamond are limited to two kinds of protein crystals. We wonder whether other high-quality or dislocation-free protein crystals still exhibit some imperfection. Here, we explore the existence of twisting as a cause of imperfection in high-quality protein crystals by X-ray topography with synchrotron radiation. The magnitude of twisting is quite small and cannot be detected by conventional techniques as optical and electron microscopy. The formation of twisting may be related to the geometric frustration mechanism proposed as a primary mechanism of twisting. This finding provides insights on high-quality protein crystals with the ubiquity of twisting.
Slip systems in triclinic hen egg-white lysozyme (Tri-HEWL) crystals, which is one of typical protein crystals, were identified by the indentation method. Eleven kinds of the slip systems are clearly...
Crystalline materials that are grown in gel media exhibit
reinforced
mechanical characteristics. Studies on the mechanical properties of
protein crystals are limited in numbers because of the difficulty
in growing high-quality large crystals. This study shows the demonstration
of the unique macroscopic mechanical properties by compression tests
of large protein crystals grown in both solution and agarose gel.
Particularly, the gel-incorporating protein crystals exhibit larger
elastic limits and a higher fracture stress compared with the native
protein crystals without gel. Conversely, the change in the Young’s
modulus corresponding to if the crystals incorporate the gel network
is negligible. This suggests that gel networks affect only the fracture
phenomenon. Thus, reinforced mechanical characteristics that cannot
be obtained by the gel or the protein crystal alone can be developed.
By combining the gel media and protein crystals, the gel-incorporating
protein crystals show the potential to toughen without sacrificing
other mechanical properties.
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