Peptide nucleic acid (PNA) is arguably one of the most successful DNA mimics, despite a most dramatic departure from the native structure of DNA. The present review summarizes 30 years of research on PNA’s chemistry, optimization of structure and function, applications as probes and diagnostics, and attempts to develop new PNA therapeutics. The discussion starts with a brief review of PNA’s binding modes and structural features, followed by the most impactful chemical modifications, PNA enabled assays and diagnostics, and discussion of the current state of development of PNA therapeutics. While many modifications have improved on PNA’s binding affinity and specificity, solubility and other biophysical properties, the original PNA is still most frequently used in diagnostic and other in vitro applications. Development of therapeutics and other in vivo applications of PNA has notably lagged behind and is still limited by insufficient bioavailability and difficulties with tissue specific delivery. Relatively high doses are required to overcome poor cellular uptake and endosomal entrapment, which increases the risk of toxicity. These limitations remain unsolved problems waiting for innovative chemistry and biology to unlock the full potential of PNA in biomedical applications.
Photoelectron spectra and solution UV absorption and magnetic circular dichroism (MCD) of hexamethyldisilane (1), hexaethyldisilane (2), hexa-tert-butyldisilane (3), and the 1,(n+2)-disila[n.n.n]propellanes [n = 4 (4) and 5 (5)] were measured, as was the linear dichroism (LD) of 3 and 4 partially aligned in stretched polyethylene. The results support the assignment of the lowest energy electronic absorption band of the disilanes 1−5 to a doubly degenerate σSiSi(HOMO) → π*SiC(LUMO) transition and of the next band, observed in the solution spectra of 2−4 and in the gas-phase spectrum of 1, to a σSiSi → σ*SiSi transition. MP2/VTZ optimized geometries of 1−5 and ab initio molecular orbital energies (HF/VTZ//MP2/VTZ) and ionization potentials (ROVGF/VTZ//MP2/VTZ) of these disilanes reproduce the reported geometries and the trends observed in the photoelectron spectra, respectively. B3LYP/6-31G(d,p) calculations of the Kohn−Sham orbital energies and TD B3LYP/6-31G(d,p) calculations of transition energies and intensities of 1 as a function of Si−Si bond length suggest that many of the features of the UV absorption spectrum of 3, including the small energy difference between the two transitions observed and the large extinction coefficient of the band peaking at higher energy (σSiSi → σ*SiSi), are due to its very long Si−Si bond.
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