Virus diversity indicates a virus reservoir in this country.

Participatory epidemiology (PE) was used on the Borana plateau of southern Ethiopia to understand pastoralist's perceptions of the clinical and epidemiological features of foot and mouth disease (FMD) in cattle. Matrix scoring showed good agreement between informant groups on the clinical signs of acute and chronic FMD, and findings were cross-checked by clinical examination of cattle and assessment of previous clinical FMD at herd level by detection of antibody to non structural proteins of FMD virus. The positive predictive value of pastoralist's diagnosis of FMD at herd level was 93.1%. The annual age-specific incidence and mortality of acute FMD in 50 herds was estimated using proportional piling. The estimated mean incidence of acute FMD varied from in 18.5% in cattle less than two years of age to 14.0% in cattle three to four years of age. The estimated mean mortality due to acute FMD varied from 2.8% in cattle less than two years of age to 0.3% in cattle three of age or older. Pearson correlation coefficients for acute FMD by age group were -0.12 (p>0.05) for incidence and -0.59 (p<0.001) for mortality. Estimates of the annual incidence of chronic FMD varied from 0.2% in cattle less than two years of age to 1.8% in cattle three to four years of age. The Pearson correlation coefficient for the incidence of chronic FMD by age group was 0.47 (p<0.001). Outbreaks of FMD peaked in Borana cattle during the two dry seasons and were attributed to increased cattle movement to dry season grazing areas. The mean seroprevalence of FMD was estimated at 21% (n=920) and 55.2% of herds (n=116) tested seropositive. Serotyping of 120 seropositive samples indicated serotypes O (99.2%), A (95.8%), SAT 2 (80%) and C (67.5%). The endemic nature of FMD in Borana pastoral herds is discussed in terms of the direct household-level impact of the disease, and the increasing export of cattle and chilled beef from Ethiopia.

This study aimed at determining the incidence, distribution, risk factors, and causal serotypes of foot and mouth disease (FMD) outbreaks in Ethiopia based on 5 years of retrospective outbreak data (September 2007 until August 2012). District level outbreak data were collected from 115 randomly selected districts using a questionnaire administered to district animal health officers. The national incidence of FMD outbreaks during the study period was 1.45 outbreaks per five district years. Outbreaks were geographically widespread affecting all major regional states in the country and were more frequent in the central, southern, and southeastern parts of the country. Neither long-term nor seasonal trends were observed in the incidence of outbreaks. A mixed effects logistic regression analysis revealed that the type of production system (market oriented system versus subsistence systems), presence of a major livestock market and/or route, and adjacency to a national parks or wildlife sanctuary were found to be associated with increased risk of outbreaks in the districts. FMD virus serotypes O, A, SAT 2, and SAT 1 were identified as the causal serotypes of the outbreaks during the study period. Whereas O was the dominant serotype, SAT 2 was the serotype that showed increase in relative frequency of occurrence. The estimated incidence of outbreaks is useful in assessing the economic impacts of the disease, and the identified risk factors provide important knowledge to target a progressive FMD control policy for Ethiopia.

The food-water-energy nexus concept helps to produce an integrative solutions to secure the water-related ecosystem services sustainably. This study aims to quantify and map water provisioning and soil erosion regulating services from both demand and supply sides in a spatially explicit manner. It considers the Wabe River catchment of the Omo-Gibe Basin in tropical data-sparse region of East Africa as a case study and uses the Integrated Valuation of Ecosystem Services and Trade-offs (InVEST) annual and seasonal water yield and sediment delivery models. The water demands and biophysical parameters data were collected from primary and secondary sources and prepared according to the requirement of the models. The models output were validated after conducting sensitivity analysis of the input parameters. The result shows that the rainfall amount of the catchment is highly seasonal, which causes the surface water to vary according to the seasons. The high annual precipitation and low actual evapotranspiration of the catchment resulted high annual water yields. However, the people in the catchment did not satisfied their domestic water demand as result of inaccessibility and poor management of the rain water. The high net supply of water, especially in the rainy season, carries detached top soil via heavy rainfall in the upper catchment areas. Even though the existing land cover and management practices contribute to sediment retention, a large amount of sediment is exported to rivers, which jeopardizes the food and energy security. Thus, the management of water is essential for enhancing the security of the food-water-energy nexus in the catchment. The methods applied in this study can increase spatial understanding of the water-related ecosystem services especially in data-sparse catchments of the tropics, and lead to improvement of water management to enhance the security nexus.

<span>Partial 1D gene characterization was used to study phylogenetic relationships between 17 serotype O foot-and-mouth disease (FMD) viruses in Ethiopia as well as with other O-type isolates from Eritrea, Kenya, South and West Africa, the Middle East, Asia and South America. A homologous region of 495 bp corresponding to the C-terminus end of the 1D gene was used for phylogenetic analysis. This study described three lineages, <em>viz.</em> African/Middle East-Asia, Cathay and South American. Within lineage I, three topotypes were defined, viz. East and West Africa and the Middle East-Asia together with the South African isolate. The Ethiopian isolates clustered as part of topotype I, the East African topotype. Two clades (based on &lt; 12% nucleotide difference) A and B were identified within the East African isolates, with clade A being further classified into three significant branches, A1 (80 % bootstrap support), A2 (89 % bootstrap support) and A3 (94 % bootstrap support). Clade B consisted of two Kenyan isolates. Within topotype I, the 17 Ethiopian isolates showed genetic heterogeneity between themselves with sequence differences ranging from 4.6-14 %. Lineage 2 and 3 could be equated to two significant topotypes, <em>viz.</em> Cathay and South America. Comparison of amino acid variability at the immunodominant sites between the vaccine strain (ETH/19/77) and other Ethiopian outbreak isolates revealed variations within these sites. These results encourage further work towards the reassessment of the type O vaccine strain currently being used in Ethiopia to provide protection against field variants of the virus.</span>