The 2016 Kumamoto earthquake, including two large (Mw ≥ 6.0) foreshocks and an Mw 7.0 mainshock, occurred in the Hinagu and Futagawa fault zones in the middle of Kyushu island, Japan. Here, we obtain the complex coseismic deformation field associated with this earthquake from Advanced Land Observation Satellite-2 (ALOS-2) and Sentinel-1A Interferometric Synthetic Aperture Radar (InSAR) data. These InSAR data, in combination with available Global Positioning System (GPS) data, are then used to determine an optimal four-segment fault geometry with the jRi method, which considers both data misfit and the perturbation error from data noise. Our preferred slip distribution model indicates that the rupture is dominated by right-lateral strike-slip, with a significant normal slip component. The largest asperity is located on the northern segment of the Futagawa fault, with a maximum slip of 5.6 m at a 5–6 km depth. The estimated shallow slips along the Futagawa fault and northern Hinagu fault are consistent with the displacements of surface ruptures from the field investigation, suggesting a shallow slip deficit. The total geodetic moment release is estimated to be 4.89 × 1019 Nm (Mw 7.09), which is slightly larger than seismological estimates. The calculated static Coulomb stress changes induced by the preferred slip distribution model cannot completely explain the spatial distribution of aftershocks. Sensitivity analysis of Coulomb stress change implies that aftershocks in the stress shadow area may be driven by aseismic creep or triggered by dynamic stress transfer, requiring further investigation.