Seventy-five isolates of Fusarium oxysporum f.sp. cepae, the causal agent of basal plate rot on onion, were obtained from seven provinces of Turkey. The isolates were characterized by vegetative compatibility grouping (VCGs) and restriction fragment length polymorphism (RFLP) analysis of the nuclear ribosomal DNA intergenic spacer region (IGS). Forty-eight vegetative compatibility groups were found, each containing a single isolate. Only one isolate formed strong heterokaryons with the reference isolates of VCG 0423. Five isolates were heterokaryon self-incompatible. Restriction fragment analysis with six different enzymes revealed 13 IGS types among 75 F. oxysporum isolates from Turkey as well as 16 reference isolates from Colorado, USA. The majority of single-member VCGs produced identical RFLP banding patterns with minor deviations, considerably different from those of the reference VCG isolates. These results suggested that isolates of F. oxysporum f.sp. cepae in Turkey derived from distinct clonal lineages and mutations at one or more vegetative compatibility loci restrict heterokaryon formation.

Forty-two isolates of Rhizoctonia spp. were obtained from onion in Amasya, Turkey. Of these, 29% were Rhizoctonia solani (AG-4), 69% were Waitea circinata var. zeae (Rhizoctonia zeae) and 2% were binucleate Rhizoctonia (AG-B). Most of the isolates were recovered from rhizosphere soil. In pathogenicity tests on onion, R. solani AG-4 caused the greatest disease severity, those of W. circinata var. zeae were moderately virulent but binucleate Rhizoctonia isolates were of low virulence. This is the first report of binucleate Rhizoctonia AG-B and W. circinata var. zeae occurring on onion in Turkey.www.blackwell-synergy.com

Türkkan M., Erper I. (2014): Evaluation of antifungal activity of sodium salts against onion basal rot caused by Fusarium oxysporum f.sp. cepae. Plant Protect. Sci., 50: 19-25.The efficacy of twelve sodium salts as possible alternatives to synthetic fungicides for the control of onion basal rot caused by Fusarium oxysporum f.sp. cepae was evaluated. In vitro tests showed that there were significant differences between the inhibitory effects of sodium salts on the mycelial growth (P ≤ 0.05) and 2% (w/v) concentrations of sodium metabisulfite and sodium fluoride completely inhibited mycelial growth of the fungus, while other salts did not. Sodium metabisulfite and sodium phosphate monobasic had lower pH values than the other salts. Unlike sodium metabisulfite, sodium phosphate monobasic could not decrease the mycelial growth. The ED 50 , minimum inhibition concentration (MIC), and minimum fungicidal concentration (MFC) values indicated that sodium metabisulfite was more inhibitory to the fungus compared to sodium fluoride. In soil tests, inhibitory effect of sodium metabisulfite on the fungus was higher than that of sodium fluoride, where sodium metabisulfite completely inhibited mycelial growth at even 0.4% concentration.

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A total of 132 Rhizoctonia isolates were recovered from red cabbage plants with root rot and wirestem symptoms in the province of Samsun (Turkey) between 2018 and 2019. Based on the sequence analysis of the internal transcribed spacer (ITS) region located between the 18S and 28S ribosomal RNA genes and including nuclear staining, these 124 isolates were assigned to multinucleate Rhizoctonia solani, and eight were binucleate Rhizoctonia. The most prevalent anastomosis group (AG) was AG 4 (84%), which was subdivided into AG 4 HG-I (81%) and AG 4 HG-III (3%), followed by AG 5 (10%) and AG-A (6%), respectively. The unweighted pair group method phylogenetic tree resulting from the data of 68 isolates with the inter-PBS amplification DNA profiling method based on interspersed retrotransposon element sequences confirmed the differentiation of AGs with a higher resolution. In the greenhouse experiment with representative isolates (n = 24) from AGs on red cabbage (cv. Rondale), the disease severity index was between 3.33 and 4.0 for multinucleate AG isolates and ranged from 2.5 to 3.17 for AG-A isolates. In the pathogenicity assay of six red cabbage cultivars, one isolate for each AG was tested using a similar method, and all cultivars were susceptible to AG 4 HG-I and AG 4 HG-III isolates. Redriver and Remale were moderately susceptible, while Rescue, Travero, Integro, and Rondale were susceptible to the AG 5 isolate. The results indicate that the most prevalent and aggressive AGs of Rhizoctonia are devastating pathogens to red cabbage, which means that rotation with nonhost-crops for these AGs may be the most effective control strategy. This is the first comprehensive study of Rhizoctonia isolates in red cabbage using a molecular approach to assess genetic diversity using iPBS-amplified DNA profiling.