Non-perennial rivers and streams (NPRS) cover N 50% of the global river network. They are particularly predominant in Mediterranean Europe as a result of dry climate conditions, climate change and land use development. Historically, both scientists and policy makers underestimated the importance of NRPS for nature and humans alike, mainly because they have been considered as systems of low ecological and economic value. During the past decades, diminishing water resources have increased the spatial and temporal extent of artificial NPRS as well as their exposure to multiple stressors, which threatening their ecological integrity, biodiversity and ecosystem services. In this paper, we provide a comprehensive overview of the structural and functional characteristics of NPRS in the European Mediterranean, and discuss gaps and problems in their management, concerning their typology, ecological assessment, legislative and policy protection, and incorporation in River Basin Management Contents lists available at ScienceDirect Science of the Total Environment j o u r n a l h o m e p a g e : w w w . e l s e v i e r . c o m / l o c a t e / s c i t o t e n vPlans. Because NPRS comprise highly unstable ecosystems, with strong and often unpredictable temporal and spatial variability -at least as far as it is possible to assess -we outline the future research needs required to better understand, manage and conserve them as highly valuable and sensitive ecosystems. Efficient collaborative activities among multidisciplinary research groups aiming to create innovative knowledge, water managers and policy makers are urgently needed in order to establish an appropriate methodological and legislative background. The incorporation of NPRS in EU-Med River Basin Management Plans in combination with the application of ecological flows is a first step towards enhancing NPRS management and conservation in order to effectively safeguard these highly valuable albeit threatened ecosystems.

Temporary streams are those water courses that undergo the recurrent cessation of flow or the complete drying of their channel. The structure and composition of biological communities in temporary stream reaches are strongly dependent on the temporal changes of the aquatic habitats determined by the hydrological conditions. Therefore, the structural and functional characteristics of aquatic fauna to assess the ecological quality of a temporary stream reach cannot be used without taking into account the controls imposed by the hydrological regime. This paper develops methods for analysing temporary streams' aquatic regimes, based on the definition of six aquatic states that summarize the transient sets of mesohabitats occurring on a given reach at a particular moment, depending on the hydrological conditions: <i>Hyperrheic, Eurheic, Oligorheic, Arheic, Hyporheic</i> and <i>Edaphic</i>. When the hydrological conditions lead to a change in the aquatic state, the structure and composition of the aquatic community changes according to the new set of available habitats. We used the water discharge records from gauging stations or simulations with rainfall-runoff models to infer the temporal patterns of occurrence of these states in the Aquatic States Frequency Graph we developed. The visual analysis of this graph is complemented by the development of two metrics which describe the permanence of flow and the seasonal predictability of zero flow periods. Finally, a classification of temporary streams in four aquatic regimes in terms of their influence over the development of aquatic life is updated from the existing classifications, with stream aquatic regimes defined as <i>Permanent, Temporary-pools, Temporary-dry</i> and <i>Episodic</i>. While aquatic regimes describe the long-term overall variability of the hydrological conditions of the river section and have been used for many years by hydrologists and ecologists, aquatic states describe the availability of mesohabitats in given periods that determine the presence of different biotic assemblages. This novel concept links hydrological and ecological conditions in a unique way. All these methods were implemented with data from eight temporary streams around the Mediterranean within the MIRAGE project. Their application was a precondition to assessing the ecological quality of these streams

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Water stress in Mediterranean countries is the result of both variable and changing climatic conditions and widespread anthropogenic pressures. Evrotas, an intermittent river located in Southern Greece, was used as a case study to assess the impacts of water stress on Mediterranean lotic ecosystems. Based on hydrological analyses, it was revealed that during prolonged drought years, such as the summers of 2007 and 2008, the vast majority of the Evrotas riverbed was completely desiccated, primarily as a result of substantial water abstraction for irrigation. The effects of desiccation on the riverine ecosystem were evaluated using fish and macroinvertebrate assemblages according to the demands of the Water Framework Directive 2000/60/EC (WFD). Faunal responses to water stress were assessed through comparisons of assemblages attributes in perennial and intermittent reaches and pre-drought versus postdrought communities. Effects of hydrological disturbance on fish species richness, density, percentage composition and size structure were more pronounced in intermittent than in perennial sites. The most obvious and immediate impact was the elimination of populations in the intermittent reaches. However, upon flow resumption, the recolonisation from upstream perennial reaches began, thereby permitting partial re-establishment of the depleted fish communities. Nevertheless, the structural integrity of fish communities remained severely impacted and recovery was markedly slow. On the contrary, post-drought macroinvertebrate assemblages were not affected by summer droughts, and the recruitment processes were rapid after flow resumption. Our findings point to the necessity of establishing a distinction between naturally and artificially driven intermittent rivers. We, therefore, propose the introduction of an ''artificially intermittent Mediterranean river'' condition within the context of the WFD assessment applications.