Emerging diseases are impacting animals under high-density culture, yet few studies assess their importance to wild populations. Microparasites selected for enhanced virulence in culture settings should be less successful maintaining infectivity in wild populations, as once the host dies, there are limited opportunities to infect new individuals. Instead, moderately virulent microparasites persisting for long periods across multiple environments are of greatest concern. Evolved resistance to endemic microparasites may reduce susceptibilities, but as barriers to microparasite distributions are weakened, and environments become more stressful, unexposed populations may be impacted and pathogenicity enhanced. We provide an overview of the evolutionary and ecological impacts of infectious diseases in wild salmon and suggest ways in which modern technologies can elucidate the microparasites of greatest potential import. We present four case studies that resolve microparasite impacts on adult salmon migration success, impact of river warming on microparasite replication, and infection status on susceptibility to predation. Future health of wild salmon must be considered in a holistic context that includes the cumulative or synergistic impacts of multiple stressors. These approaches will identify populations at greatest risk, critically needed to manage and potentially ameliorate the shifts in current or future trajectories of wild populations.

Long-term population viability of Fraser River sockeye salmon (Oncorhynchus nerka) is threatened by unusually high levels of mortality as they swim to their spawning areas before they spawn. Functional genomic studies on biopsied gill tissue from tagged wild adults that were tracked through ocean and river environments revealed physiological profiles predictive of successful migration and spawning. We identified a common genomic profile that was correlated with survival in each study. In ocean-tagged fish, a mortality-related genomic signature was associated with a 13.5-fold greater chance of dying en route. In river-tagged fish, the same genomic signature was associated with a 50% increase in mortality before reaching the spawning grounds in one of three stocks tested. At the spawning grounds, the same signature was associated with 3.7-fold greater odds of dying without spawning. Functional analysis raises the possibility that the mortality-related signature reflects a viral infection.

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Abstract. The biochemical composition of eggs spawned from rock scallops Crassadoma gigantea (Gray) collected from Clayoquot Sound, Vancouver Island (British Columbia, Canada) in the winter of 1987 and the summer of 1988, differed significantly only in lipid and soluble-ash contents. Major macronutrients were catabolized simultaneously and linearly with time of embryogenesis. Total egg energy expended during development was 11.8 kJ g-1 derived 46.7, 9.8 and 43.5%, from lipid, carbohydrate, and protein, respectively. Glucose in the egg was the dominant source of carbohydrate energy. Deposition of shell was linear with time of embryogenesis and the formation of 44.8% dry wt of shell in the early larval stage, referred to as the D-larva, consumed 64.4% of the total energy expended. Energy required for shell formation was 17.55 kJ g-1. The RNA:DNA ratio declined exponentially from 18.6 in the egg to 2.21 in the D-larva, which was consistent with that of adult bivalves. Many changes in fatty acid composition were linear with time of embryogenesis, and the percentage of n3-and n6-higher unsaturated fatty acids to total polyethylenic acids exhibited significant declining and increasing trends, respectively. The linear rate of catabolism of eicosapentaenoic acid, 20:5n3, and the constant level of docosahexaenoic acid, 22:6n3, illustrated an energy and a structural role, respectively, for these dominant acids in the embryonic development of the rock scallop.