Premise of the study:Low-elevation surveys with small aerial drones (micro–unmanned aerial vehicles [UAVs]) may be used for a wide variety of applications in plant ecology, including mapping vegetation over small- to medium-sized regions. We provide an overview of methods and procedures for conducting surveys and illustrate some of these applications.Methods:Aerial images were obtained by flying a small drone along transects over the area of interest. Images were used to create a composite image (orthomosaic) and a digital surface model (DSM). Vegetation classification was conducted manually and using an automated routine. Coverage of an individual species was estimated from aerial images.Results:We created a vegetation map for the entire region from the orthomosaic and DSM, and mapped the density of one species. Comparison of our manual and automated habitat classification confirmed that our mapping methods were accurate. A species with high contrast to the background matrix allowed adequate estimate of its coverage.Discussion:The example surveys demonstrate that small aerial drones are capable of gathering large amounts of information on the distribution of vegetation and individual species with minimal impact to sensitive habitats. Low-elevation aerial surveys have potential for a wide range of applications in plant ecology.
Premise Seed dispersal allows plants to colonize new sites and contributes to gene flow among populations. Despite its fundamental importance to ecological and evolutionary processes, our understanding of seed dispersal is limited due to the difficulty of directly observing dispersal events. This is particularly true for the majority of plant species that are considered to have gravity as their primary dispersal mechanism. The potential for long‐distance movement of gravity‐dispersed seeds by secondary dispersal vectors is rarely evaluated. Methods We employ whole‐genome assays of maternally inherited cpDNA in Plagiobothrys nothofulvus to resolve patterns of genetic variation due to effective (realized) seed dispersal within a 16 hectare prairie that is characterized by a mosaic of habitat types. We evaluate the effects of microgeographic landscape features extracted from micro‐UAV aerial surveys on patterns of seed dispersal using landscape genetics methods. Results We found evidence of high resistance to seed‐mediated gene flow (effective dispersal) within patches of Plagiobothrys nothofulvus, and strong genetic structure over distances of less than 20 m. Geographic distance was a poor predictor of dispersal distance, while landscape features had stronger influences on patterns of dispersal (distance and direction of seed movement). Patterns of dispersal were best predicted by the combined distribution of flower patches, habitat type, and the network of vole runways, with the latter explaining the largest proportion of variation in the model. Conclusions Our results suggest that primary dispersal occurs mostly within microhabitats and infrequent secondary dispersal may occur over longer distances due to the activity of small mammals and other vertebrates.
Background: Foraging movements of animals shape their efficiency in finding food and their exposure to the environment while doing so. Our goal was to test the optimal foraging theory prediction that territorial acorn woodpeckers (Melanerpes formicivorus) should forage closer to their 'central place' in years of high resource availability and further afield when resources are less available. We used genetic data on acorns stored in caching sites (granaries) and adult trees for two oak species (Quercus lobata and Quercus agrifolia) to track acorn movements across oak savanna habitat in central California. We also compared the patterns of trees these territorial bird groups foraged upon, examining the effective numbers of source trees represented within single granaries (α), the effective number of granaries (β), the diversity across all granaries (γ), and the overlap (ω) in source trees among different granaries, both within and across years. Results: In line with optimal foraging theory predictions, most bird groups foraged shorter distances in years with higher acorn abundance, although we found some exceptionally long distance foraging movements in high acorn crop years. The α-diversity values were significantly higher for Quercus lobata, but not for Quercus agrifolia, in years of high acorn production. We also found that different woodpecker family groups visited almost completely non-overlapping sets of source trees, and each particular group visited largely the same set of source trees from year to year, indicating strong territorial site fidelity. Conclusions: Acorn woodpeckers forage in a pattern consistent with optimal foraging theory, with a few fascinating exceptions of long distance movement. The number of trees they visit increases in years of high acorn availability, but the extra trees visited are mostly local. The territorial social behavior of the birds also restricts their movement patterns to a minimally overlapping subsets of trees, but the median movement distance appears to be shaped more by the availability of trees with acorns than by rigid territorial boundaries.
Hybridization can serve as an evolutionary stimulus, but we have little understanding of introgression at early stages of hybrid zone formation. We analyze reproductive isolation and introgression between a range-limited and a widespread species. Reproductive barriers are estimated based on differences in flowering time, ecogeographic distributions, and seed set from crosses. We find an asymmetrical mating barrier due to cytonuclear incompatibility that is consistent with observed clusters of coincident and concordant tension zone clines (barrier loci) for mtDNA haplotypes and nuclear SNPs. These groups of concordant clines are spread across the hybrid zone, resulting in weak coupling among barrier loci and extensive introgression. Neutral clines had nearly equal introgression into both species' ranges, whereas putative cases of adaptive introgression had exceptionally wide clines with centers shifted toward one species. Analyses of cline shape indicate that secondary contact was initiated within the last 800 generations with the per-generation dispersal between 200 and 400 m, and provide some of the first estimates of the strength of selection required to account for observed levels of adaptive introgression. The weak species boundary between these species appears to be in early stages of dissolution, and ultimately will precipitate genetic swamping of the range-limited species.
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