Scelerocarya birrea is an important fruit tree that is widely used by the rural populations in most regions in which it is found, for its fruits, bark, timber and even its roots. The local communities harvest the tree products from the wild with minimal attempts to grow it on-farm. The sustainability of such wild harvests is threatened by agriculture, overgrazing and overexploitation for other purposes. Therefore, the species needs urgent conservation measures in addition to selecting superior germplasm for on-farm tree management that will facilitate ease of species cultivation. This has prompted the International Center for Research in Agroforestry (ICRAF) and partners to collect and manage S. birrea germplasm in field genebanks as the initial step towards the species domestication and conservation. In order to effectively manage germplasm, it is important to establish the collection genetic diversity. Six ISSR markers yielded a total of 76 polymorphic bands across the 257 accessions studied. Percentage of polymorphic loci and observed heterozygosity ranged from 75% to 7.89% and H=0.362 to H=0.043, respectively. The partitioning of genetic diversity found a higher (86% P>0.001) intra-population variation and low inter-population variation, typical of the outcrossing nature of S. birrea. According to Jaccard's dissimilarity index, the highest genetic distance between accessions was 1.000 and the least genetic distance was 0.000. Neighbour-joining clustering grouped the accessions into three major clusters and twenty probable duplicates were identified, which should be eliminated to cut down the cost of conservation. The results obtained suggest that S. birrea ICRAF field genebank collections have a comparatively rich gene pool and, hence, valuable for conservation of S. birrea. The twenty samples showing duplicates would be good for evaluating performance of this long-lived tree species in both locations.
Tree species are characterized by their perennial growth habit, woody morphology, long juvenile period phase, mostly outcrossing behaviour, highly heterozygosity genetic makeup, and relatively high genetic diversity. The economically important trees have been an integral part of the human life system due to their provision of timber, fruit, fodder, and medicinal and/or health benefits. Despite its widespread application in agriculture, industrial and medicinal values, the molecular aspects of key economic traits of many tree species remain largely unexplored. Over the past two decades, research on forest tree genomics has generally lagged behind that of other agronomic crops. Genomic research on trees is motivated by the need to support genetic improvement programmes mostly for food trees and timber, and develop diagnostic tools to assist in recommendation for optimum conservation, restoration and management of natural populations. Research on long-lived woody perennials is extending our molecular knowledge and understanding of complex life histories and adaptations to the environment, enriching a field that has traditionally drawn its biological inference from a few short-lived herbaceous species. These concerns have fostered research aimed at deciphering the genomic basis of complex traits that are related to the adaptive value of trees. This review summarizes the highlights of tree genomics and offers some priorities for accelerating progress in the next decade.
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