The Flaviviridae is a family of small enveloped viruses with RNA genomes of 9000–13 000 bases. Most infect mammals and birds. Many flaviviruses are host-specific and pathogenic, such as hepatitis C virus in the genus Hepacivirus. The majority of known members in the genus Flavivirus are arthropod borne, and many are important human and veterinary pathogens (e.g. yellow fever virus, dengue virus). This is a summary of the current International Committee on Taxonomy of Viruses (ICTV) report on the taxonomy of the Flaviviridae, which is available at www.ictv.global/report/flaviviridae.
The recent emergence and spread of dengue hemorrhagic fever in the Americas have been a major source of concern. Efforts to control this disease are dependent on understanding the pathogenicity of dengue viruses and their transmission dynamics. Pathogenicity studies have been hampered by the lack of in vitro or in vivo models of severe dengue disease. Alternatively, molecular epidemiologic studies which associate certain dengue virus genetic types with severe dengue outbreaks may point to strains with increased pathogenicity. The comparison of nucleotide sequences (240 bp) from the E/NS1 gene region of the dengue virus genome has been shown to reflect evolutionary relationships and geographic origins of dengue virus strains. This approach was used to demonstrate an association between the introduction of two distinct genotypes of dengue type 2 virus and the appearance of dengue hemorrhagic fever in the Americas. Phylogenetic analyses suggest that these genotypes originated in Southeast Asia and that they displaced the native, American genotype in at least four countries. Vaccination and other control efforts should therefore be directed at decreasing the transmission of these "virulent" genotypes.
We propose the creation of seven new species in the genus
Pestivirus (family Flaviviridae) in
addition to the four existing species, and naming species in a host-independent
manner using the format Pestivirus X. Only the virus species
names would change; virus isolates would still be referred to by their original
names. The original species would be re-designated as Pestivirus
A (original designation Bovine viral
diarrhea virus 1), Pestivirus B (Bovine
viral diarrhea virus 2), Pestivirus C
(Classical swine fever virus) and Pestivirus
D (Border disease virus). The seven new species
(and example isolates) would be Pestivirus E (pronghorn
pestivirus), Pestivirus F (Bungowannah virus),
Pestivirus G (giraffe pestivirus), Pestivirus
H (Hobi-like pestivirus), Pestivirus I (Aydin-like
pestivirus), Pestivirus J (rat pestivirus) and
Pestivirus K (atypical porcine pestivirus). A bat-derived
virus and pestiviruses identified from sheep and goat (Tunisian sheep
pestiviruses), which lack complete coding region sequences, may represent two
additional species.
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