International audienceAutomatically detecting objects in images or video sequences is one of the most relevant and frequently tackled tasks in computer vision and pattern recognition. The starting point for this work is a very general model-based approach to object detection. The problem is turned into a global continuous optimization one: given a parametric model of the object to be detected within an image, a function is maximized, which represents the similarity between the model and a region of the image under investigation. In particular, in this work, the optimization problem is tackled using Particle Swarm Optimization (PSO) and Differential Evolution (DE). We compare the performances of these optimization techniques on two real-world paradigmatic problems, onto which many other real-world object detection problems can be mapped: hippocampus localization in histological images and human body pose estimation in video sequences. In the former, a 2D deformable model of a section of the hippocampus is fit to the corresponding region of a histological image, to accurately localize such a structure and analyze gene expression in specific sub-regions. In the latter, an articulated 3D model of a human body is matched against a set of images of a human performing some action, taken from different perspectives, to estimate the subject's posture in space. Given the significant computational burden imposed by this approach, we implemented PSO and DE as parallel algorithms within the nVIDIA TM CUDA computing architecture
International audienceWe perform a two-step segmentation of the hippocam-pus in histological images. First, we maximize the overlap of an empirically-derived parametric Deformable Model with two crucial landmark sub-structures in the brain image using Differential Evolution. Then, the points located in the previous step determine the region where a thresh-olding technique based on Otsu's method is to be applied. Finally, the segmentation is expanded employing Random Forest in the regions not covered by the model. Our approach showed an average segmentation accuracy of the 92.25% and 92.11% on test sets comprising 15 real and 15 synthetic images, respectively
International audienceThe Allen Brain Atlas (ABA) is a cellular-resolution, genome-wide map of gene expression in the mouse brain which allows users to compare gene expression patterns in neuroanatomical structures. The correct localization of the structures is the first step to carry on this comparison in an automatic way. In this paper we present a completely automatic tool for the localization of the hippocampus that can be easily adapted also to other subcortical structures. This goal is achieved in two distinct phases. The first phase, called "best reference slice selection", is performed by comparing the image of the brain with a reference Atlas provided by ABA using a two-step affine registration. By doing so the system is able to automatically find to which brain section the image corresponds and wherein the image the hippocampus is roughly located. The second phase, the proper "hippocampus localization", is based on a method that combines Particle Swarm Optimization (PSO) and a novel technique inspired by Active Shape Models (ASMs). The hippocampus is found by adapting a deformable model derived statistically, in order to make it overlap with the hippocampus image. Experiments on a test set of 120 images yielded a perfect or good localization in 89.2% of cases
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