Coronaviruses have been documented to replicate in numerous species of vertebrates, and multiple spillovers of coronaviruses from animals into humans have founded human epidemics. The COVID-19 epidemic likely derived from a spillover of SARS-CoV-2 from bats into humans, possibly via an intermediate host.

There is a growing need for collaborative and interdisciplinary research in addressing global ecological challenges, and early career researchers (ECRs) often play a vital role in such ventures. But despite the desire for such approaches, forming new and interdisciplinary collaborations is risky, and disproportionately so for ECRs, whose perspectives on this topic are rarely heard. Here, we present common perceptions among ECRs regarding opportunities for intra‐ and interdisciplinary collaboration, and barriers preventing such collaboration from taking place. We also discuss possible solutions, and the ecological outcomes of fostering more collaboration. The perceptions discussed have been distilled from a two‐day workshop in New Zealand, aiming to investigate the potential for collaboration between 34 ECRs in distinct ecological disciplines across ten research institutes. Commonality in methodology or research aims was vital for potential collaborations to be considered worthwhile, but differences in spatial or temporal scales were a key disconnect that hindered numerous potential crossovers. Individual connectivity and institutional structures were commonly perceived as barriers to acting collaboratively in general. Specifically, barriers included having a small peer network, lack of access to funding, and concerns over the risk/reward ratio of forming new collaborations. Overcoming barriers will require active, practical support from institutions, funding bodies and mentors, and participants commonly called for specific funding support and the creation of ECR‐focused spaces to better foster collaborative behavior. Fostering interdisciplinary ECR collaborations in ecology was perceived to be useful in creating larger and more useful datasets and tools, and more scalable and transferable models and outcomes. Adopting practices that facilitate more ECR‐led interdisciplinary collaboration will help generate a more integrative understanding of ecological systems globally.

In 2014, antimicrobial drug–resistant Campylobacter jejuni sequence type 6964 emerged contemporaneously in poultry from 3 supply companies in the North Island of New Zealand and as a major cause of campylobacteriosis in humans in New Zealand. This lineage, not previously identified in New Zealand, was resistant to tetracycline and fluoroquinolones. Genomic analysis revealed divergence into 2 major clades; both clades were associated with human infection, 1 with poultry companies A and B and the other with company C. Accessory genome evolution was associated with a plasmid, phage insertions, and natural transformation. We hypothesize that the tetO gene and a phage were inserted into the chromosome after conjugation, leaving a remnant plasmid that was lost from isolates from company C. The emergence and rapid spread of a resistant clone of C. jejuni in New Zealand, coupled with evolutionary change in the accessory genome, demonstrate the need for ongoing Campylobacter surveillance among poultry and humans.

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The SARS-CoV-2 pandemic likely began by spillover from bats to humans; today multiple animal species are known to be susceptible to infection. White-tailed deer, Odocoileus virginianus are infected in the United States at substantial levels, raising concerns about the formation of a new animal reservoir and potential of spill-back of new variants into humans1. Here we characterize SARS CoV-2 in deer from Pennsylvania (PA) sampled during fall and winter 2021. Of 93 nasal swab samples analyzed by RT-qPCR, 18 (19.3%) were positive for SARS-CoV-2. Seven whole-genome sequences were obtained, which were annotated as alpha and delta variants, the first reported observations of these lineages in deer, documenting multiple new jumps from humans to deer. The alpha lineage persisted in deer after its displacement by delta in humans, and deer-derived alpha variants diverged significantly from those in humans, consistent with a distinctive evolutionary trajectory in deer.