Atrial fibrillation (AF) affects over 33 million individuals worldwide1 and has a complex heritability.2 We conducted the largest meta-analysis of genome-wide association studies for AF to date, consisting of over half a million individuals including 65,446 with AF. In total, we identified 97 loci significantly associated with AF including 67 of which were novel in a combined-ancestry analysis, and 3 in a European specific analysis. We sought to identify AF-associated genes at the GWAS loci by performing RNA-sequencing and expression quantitative trait loci (eQTL) analyses in 101 left atrial samples, the most relevant tissue for AF. We also performed transcriptome-wide analyses that identified 57 AF-associated genes, 42 of which overlap with GWAS loci. The identified loci implicate genes enriched within cardiac developmental, electrophysiological, contractile and structural pathways. These results extend our understanding of the biological pathways underlying AF and may facilitate the development of therapeutics for AF.
Background: Heart failure (HF) is a morbid and heritable disorder for which the biological mechanisms are incompletely understood. We therefore examined genetic associations with HF in a large national biobank, and assessed whether refined phenotypic classification would facilitate genetic discovery. Methods: We defined all-cause HF among 488,010 participants from the UK Biobank and performed a genome-wide association analysis. We refined the HF phenotype by classifying individuals with left ventricular dysfunction and without coronary artery disease (CAD) as having nonischemic cardiomyopathy (NICM), and repeated a genetic association analysis. We then pursued replication of lead HF and NICM variants in independent cohorts, and performed adjusted association analyses to assess whether identified genetic associations were mediated through clinical HF risk factors. In addition, we tested rare, loss-of-function mutations in 24 known dilated cardiomyopathy (DCM) genes for association with HF and NICM. Finally, we examined associations between lead variants and left ventricular structure and function among individuals without HF using cardiac magnetic resonance imaging (n=4,158) and echocardiographic data (n=30,201). Results: We identified 7,382 participants with all-cause HF in the UK Biobank. Genome-wide association analysis of all-cause HF identified several suggestive loci (P < 1×10 −6), the majority linked to upstream HF risk factors, i.e. CAD (CDKN2B-AS1 and MAP3K7CL) and atrial fibrillation (PITX2). Refining the HF phenotype yielded a subset of 2,038 NICM cases. In contrast to all-cause HF, genetic analysis of NICM revealed suggestive loci that have been implicated in DCM (BAG3, CLCNKA-ZBTB17). DCM signals arising from our NICM analysis replicated in independent cohorts, persisted after HF risk factor adjustment, and were associated with indices of left ventricular dysfunction in individuals without clinical HF. Additionally, analyses of loss-offunction variants implicated BAG3 as a disease-susceptibility gene for NICM (loss-of-function variant carrier frequency=0.01%, OR=12.03, P=3.62×10 −5). Conclusions: We found several distinct genetic mechanisms of all-cause HF in a national biobank that reflect well-known HF risk factors. Phenotypic refinement to a NICM subtype appeared to facilitate the discovery of genetic signals that act independent of clinical HF risk factors, and which are associated with subclinical left ventricular dysfunction.
Abstract-We propose a novel algorithm for the compression of ECG signals, in particular QRS complexes. The algorithm is based on the expansion of signals with compact support into a basis of discrete Hermite functions. These functions can be constructed by sampling continuous Hermite functions at specific sampling points. They form an orthogonal basis in the underlying signal space. The proposed algorithm relies on the theory of signal models based on orthogonal polynomials. We demonstrate that the constructed discrete Hermite functions have important advantages compared to continuous Hermite functions, which have previously been suggested for the compression of QRS complexes. Our algorithm achieves higher compression ratios compared with previously reported algorithms based on continuous Hermite functions, discrete Fourier, cosine, or wavelet transforms.
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