Human ether-à-go-go–related gene (hERG, KCNH2) voltage-activated potassium channels are critical for cardiac excitability. hERG channels have characteristic slow closing (deactivation), which is auto-regulated by a direct interaction between the N-terminal Per-Arnt-Sim (PAS) domain and the C-terminal cyclic nucleotide binding homology domain (CNBHD). hERG channels are not activated by the binding of extrinsic cyclic nucleotide ligands, but rather bind an “intrinsic ligand” that is composed of residues 860–862 within the CNBHD and mimics a cyclic nucleotide. The intrinsic ligand is located at the PAS–CNBHD interface, but its mechanism of action in hERG is not well understood. Here we use whole-cell patch-clamp electrophysiology and FRET spectroscopy to examine how the intrinsic ligand regulates gating. To carry out this work, we coexpress PAS (a PAS domain fused to cyan fluorescent protein) in trans with hERG “core” channels (channels with a deletion of the PAS domain fused to citrine fluorescent protein). The PAS domain in trans with hERG core channels has slow (regulated) deactivation, like that of WT hERG channels, as well as robust FRET, which indicates there is a direct functional and structural interaction of the PAS domain with the channel core. In contrast, PAS in trans with hERG F860A core channels has intermediate deactivation and intermediate FRET, indicating perturbation of the PAS domain interaction with the CNBHD. Furthermore, PAS in trans with hERG L862A core channels, or PAS in trans with hERG F860G,L862G core channels, has fast (nonregulated) deactivation and no measurable FRET, indicating abolition of the PAS and CNBHD interaction. These results indicate that the intrinsic ligand is necessary for the functional and structural interaction between the PAS domain and the CNBHD, which regulates the characteristic slow deactivation gating in hERG channels.

Sedoheptulose 7-phosphate cyclases (SH7PCs) encompass three enzymes involved in producing the core cyclitol structures of pseudoglycosides and similar bioactive natural products. One such enzyme is ValA from Streptomyces hygroscopicus subsp. jinggangensis 5008, which makes 2-epi-5-epi-valiolone as part of the biosynthesis of the agricultural antifungal agent validamycin A. We present, as the first SH7PC structure, the 2.1 Å resolution crystal structure of ValA in complex with NAD+ and Zn2+ cofactors. ValA has a fold and active site organization resembling those of the sugar phosphate cyclase dehydroquinate synthase (DHQS) and contains two notable, previously unrecognized interactions between NAD+ and Asp side chains conserved in all sugar phosphate cyclases that may influence catalysis. Because the domains of ValA adopt a nearly closed conformation even though no sugar substrate is present, comparisons with a ligand-bound DHQS provide a model for aspects of substrate binding. One striking active site difference is a loop that adopts a distinct conformation as a result of an Asp → Asn change with respect to DHQS and alters the identity and orientation of a key Arg residue. This and other active site differences in ValA are mostly localized to areas where the ValA substrate differs from that of DHQS. Sequence comparisons with a second SH7PC making a product with distinct stereochemistry lead us to postulate that the product stereochemistry of a given SH7PC is not the result of events taking place during catalysis but is accomplished by selective binding of either the α or β pyranose anomer of the substrate.

Resealing of tears in the sarcolemma of myofibers is a necessary step in the repair of muscle tissue. Recent work suggests a critical role for dysferlin in the membrane repair process and that mutations in dysferlin are responsible for limb girdle muscular dystrophy 2B and Miyoshi myopathy. Beyond membrane repair, dysferlin has been linked to SNARE-mediated exocytotic events including cytokine release and acid sphingomyelinase secretion. However, it is unclear whether dysferlin regulates SNARE-mediated membrane fusion. In this study we demonstrate a direct interaction between dysferlin and the SNARE proteins syntaxin 4 and SNAP-23. In addition, analysis of FRET and in vitro reconstituted lipid mixing assays indicate that dysferlin accelerates syntaxin 4/SNAP-23 heterodimer formation and SNARE-mediated lipid mixing in a calcium-sensitive manner. These results support a function for dysferlin as a calciumsensing SNARE effector for membrane fusion events.Limb-girdle muscular dystrophy and Miyoshi myopathy are muscle wasting diseases linked to mutations in the protein dysferlin (1-6). Dysferlin is a 238-kDa membrane protein composed of seven N-terminal C2 domains and a single pass C-terminal transmembrane domain (7,8). Early studies established a role for dysferlin in calcium-triggered sarcolemma repair with dysferlin knock-out cells displaying dysfunctional resealing of plasma membrane lesions (9, 10).More recent studies have determined that dysferlin contributes to cytokine secretion, lysosome exocytosis, acid sphingomyelinase secretion, and phagocytosis (11)(12)(13)(14). These reports suggest a wider role for dysferlin in calcium-sensitive membrane trafficking events at the cell membrane. However, the exact functions and mechanisms by which dysferlin operates remain unclear.One proposed function for dysferlin is as a calcium-sensitive scaffold for the recruitment of other proteins involved in membrane trafficking. Support for this comes from studies that have reported that the C2 domains of dysferlin bind annexins and caveolin (15)(16)(17). Dysferlin may also act as a regulator of calcium influx through interaction with T-tubule dihydropyridine receptors (18 -20). However, several studies have reported that deficiencies in dysferlin result in attenuated exocytosis and the accumulation of unfused vesicles at membrane lesions, suggesting a function in membrane fusion events that occur during repair of cell membrane wounds (9, 12). In agreement with this, dysferlin has been reported to bind calcium and the cell membrane lipids phosphatidylserine and phosphatidylinositol bisphosphate and to co-localize with the SNARE protein syntaxin 4 (21-24). Knockdown of dysferlin also results in a reduction in lysosome exocytosis and delayed release of acid sphingomyelinase, in agreement with dysferlin's proposed role in membrane fusion (11,13).Direct evidence establishing the function of dysferlin in membrane trafficking is lacking, and despite the requirement of SNAREs for membrane repair and exocytosis, no study has directly t...

A kinetic study of the reactions of thiolate ions with three Fischer-type [aryloxy(phenyl)carbene]pentacarbonyl chromium(0) complexes in 50% MeCN-50% water (v/v) is reported. Brønsted plots of the second-order rate constants are biphasic with an initial steep rise for weakly basic thiolate ions (beta(nuc) approximately equal to 1.0) followed by a slightly descending leg with a negative slope (beta(nuc) approximately equal to -0.2) for strongly basic thiolate ions. This indicates a change from rate-limiting leaving group departure at low pK(RSH)(a) to rate-limiting nucleophilic attachment at high pK(RSH)(a). The negative beta(nuc) values result from a combination of minimal progress of C-S bond formation at the transition state and the requirement for partial desolvation of the nucleophile before it enters the transition state. Possible factors that may affect the degree of bond formation in reactions of Fischer carbene complexes as well as reactions of other unsaturated electrophiles with thiolate ions are discussed.

The KCNH family comprises the ERG, EAG, and ELK voltage-activated, potassium-selective channels. Distinct from other K channels, KCNH channels contain unique structural domains, including a PAS (Per-Arnt-Sim) domain in the N-terminal region and a CNBHD (cyclic nucleotide-binding homology domain) in the C-terminal region. The intracellular PAS domains and CNBHDs interact directly and regulate some of the characteristic gating properties of each type of KCNH channel. The PAS-CNBHD interaction regulates slow closing (deactivation) of hERG channels, the kinetics of activation and pre-pulse dependent population of closed states (the Cole-Moore shift) in EAG channels and voltage-dependent potentiation in ELK channels. KCNH channels are all regulated by an intrinsic ligand motif in the C-terminal region which binds to the CNBHD. Here, we focus on some recent advances regarding the PAS-CNBHD interaction and the intrinsic ligand.