A method for mapping tissue permeability based on time-dependent diffusion measurements is presented. A pulsed field gradient sequence to measure the diffusion encoding time dependence of the diffusion coefficients based on the detection of stimulated spin echoes to enable long diffusion times is combined with a turbo spin echo sequence for fast NMR imaging (MRI). A fitting function is suggested to describe the time dependence of the apparent diffusion constant in porous (bio-)materials, even if the time range of the apparent diffusion coefficient is limited due to relaxation of the magnetization. The method is demonstrated by characterizing anisotropic cell dimensions and permeability on a subpixel level of different tissues of a carrot (Daucus carota) taproot in the radial and axial directions.Electronic supplementary materialThe online version of this article (doi:10.1007/s00249-009-0559-1) contains supplementary material, which is available to authorized users.

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Changes in the total water permeability of two cell membranes (plasmalemma and tonoplast), estimated by the effective diffusion coefficient of water (D ef), were controlled using the NMR method. The time dynamics of D ef in maize (Zea mays L.) root cells was studied in response to (i) root excision from seedling and the following 6-h incubation in the growth medium (wound stress) and (ii) the superposition of wound stress plus paraquat, which induces the excess of reactive oxygen species (ROS). The dynamics of lipid peroxidation, oxygen consumption, and heat production was studied to estimate general levels of oxidative stress in two variants of experiments. Under wound stress (the weak oxidative stress), the reversible by dithiothreitol increase in cell membrane water permeability was observed. The applicability of mercury test to aquaporin activity in our experiments was verified. The results of wound stress effect, obtained using this test, are discussed in terms of oxidative upregulation of aquaporin activity by ROS. The increase of oxidative stress in cells (wound-paraquat stress), contrary to wound stress, was accompanied by downregulation of membrane water permeability. In this case, ROS is supposed to affect the aquaporins not directly but via such processes as peroxidation of lipids, inactivation of some intracellular proteins, and relocalization of aquaporins in cells.