Kirromycin activates functions of elongation factor Tu (EF-Tu) that normally require the presence of specific effectors [Wolf et al. (1974) Proc. Nut1 Acud. Sci. U.S.A. 71, 4910-49141. As a result, the EF-Tu GTPase activity is uncoupled from aminoacyl-tRNA and ribosomes. For a better understanding of the action of the antibiotic, we have studied its effect on the interaction between EF-Tu and guanine nucleotides and compared this with the action of the physiological effectors aminoacyltRNA and elongation factor Ts (EF-Ts). Kirromycin affects both association (k; and dissociation (k' 1) rates of EF-Tu and GTP, but in opposite ways, the k: being strongly increased, whereas the kL is even more strongly decreased. This causes a lowering of the apparent K ' of this complex by two orders of magnitude, i.e. approaching that of EF-Tu . GDP. By contrast, the k : 1 and k l 1 are both increased to the same extent and consequently the apparent K ' of this complex is unchanged in the presence of the antibiotic. Thus the action of kirromycin resembles that of EF-Ts opening the EF-Tu site for GDP, thereby increasing the rate of the EF-Tu.GDP/GDP exchange, but in contrast to EF-Ts kirromycin binds preferentially to EF-Tu . GTP. Like aminoacyl-tRNA, the antibiotic induces a specific conformation that locks GTP in its site on EF-Tu. The regeneration of EF-Tu . GTP from EF-Tu .GDP does not limit the rate of GTP hydrolysis induced by kirromycin, even when aminoacyl-t RNA or ribosomes' stimulate this reaction. By contrast, the turnover activity occurring in the absence of the antibiotic and depending on aminoacyl-tRNA plus ribosomes is limited by the dissociation rate of the EF-Tu.GDP complex. Our results indicate that kirromycin induces a conformation of EF-Tu that shares features with the conformations evoked sequentially by EF-Ts, aminoacyl-tRNA and ribosomes during the elongation cycle.In each round of polypeptide chain elongation, the elongation factor Tu (EF-Tu) forms a ternary complex with GTP and aminoacyl-tRNA (aa-tRNA) that interacts with mRNA .ribosomes, resulting in the binding of aa-tRNA to the ribosome, hydrolysis of GTP and release of EF-Tu.GDP (for a review, see [ I -31). The regeneration of the ternary complex from EF-Tu .GDP is accelerated by elongation factor Ts (EF-Ts). We have shown that kirromycin, an inhibitor of protein biosynthesis and the first antibiotic having EF-Tu as its target, binds to EF-Tu in a one-to-one ratio and that the EF-Tu . kirromycin complex thus formed can still react sequentially with GTP and aa-tRNA leading to the formation of a quaternary complex [4-81. However, after the enzymatic binding of this complex to the ribosome.mRNA and associated GTP hydrolysis, the modifications introduced by kirromycin in the interactions between EF-Tu, guanine nucleotides and aa-tRNA inhibit the dissociAbbreviations. EF-Tu, elongation factor Tu; EF-Ts, elongation factor Ts; k;, , apparent association rate constant; kl, , apparent dissociation rate constant; aa-tRNA, aminoacyl transfer RNA. ation of EF-Tu f...
complexes trans,mer-[(PR3)2(CO)3M]2(«-L) with the symmetrically bridging ligands w-L = pyrazine (pz), 4,4'bipyridine (bp) and 3,6-bis(4-pyridyl)-1,2,4,5-tetrazine (4,4'-bptz) were studied by cyclic voltammetry and by IR, UV/vis/near-IR, and EPR spectroscopy. Oxidation of the electron-rich and dissociatively labile (Mo > W) systems yields M(I) species, including stable (Kc > 106 *) mixed-valent d5/d6 cations {[(PPrsMCO^Mhlpz)}"1". These mixed-valent complex ions exhibit complete delocalization on the vibrational time scale and show similar spectroscopic features as the structurally related Creutz-Taube ion {[(HgNisRuht/i-pz)}5"1". Reversible twoelectron oxidation processes and thus no mixed-valent states were observed for the bp-and 4,4'-bptz-bridged ditungsten systems. Whereas the oxidation of (PCy3)2(CO)3W(?y2-H2) is irreversible with the assumed loss of a proton, the solvates (PR3)2(CO)3M(THF) are reversibly oxidized and reduced, the latter process requiring rather negative potentials. In nonpolar solvents the neutral dinuclear complexes display very intense and strikingly narrow charge transfer bands in the near-infrared region, suggesting very little geometrical change between ground and MLCT excited states. One-electron reduction of the dinuclear complexes produces EPR-detectable radical anion complexes which show the loss of one PR3 ligand per metal center, i.e. the preference for a 16 + <5 rather than an 18 + valence electron configuration. The tungsten-centered oxidation of complexes (PR3)2(CO)3W(L) is facilitated in the order L = mpz+, pz, H2, 4,4'-bptz, bp, and THF, illustrating quantitatively the well-balanced donor and a* acceptor characteristics of the H2 ligand. From the results of this study it appears that the (PR3)2-(CO)3M fragments are suited to bind H2 because of a very finely tuned combination of -acceptor and fairly strong but not excessive -donor characteristics, in addition to the proper amount of steric shielding.
SUMMARY1. Sarcoplasmic reticulum vesicles and mitochondria were prepared from red and white skeletal muscles of the rabbit. The preparations were characterized in terms of their specific activities of citrate synthase, basal (Mg2+-dependent) and Ca2+-dependent ATPase (the latter two in the presence of NaN3 and ouabain), and their specific carbonic anhydrase activities were determined.2. Skeletal muscle mitochondria had high specific activities of citrate synthase (700-1200 mu. mg protein-1) and low carbonic anhydrase activities (0 1-0 4 u. ml mg protein-1). The latter are likely to be due to a contamination of the preparations with sarcoplasmic reticulum (s.r.)3. Preparations of s.r. vesicles showed negligible activities of citrate synthase and the expected differing patterns of basal and Ca2+-dependent ATPase in red and white muscles. Specific carbonic anhydrase activities in s.r. from both muscle types were high (2-4 u. ml mg protein-'). The highest carbonic anhydrase activity, 11 u. ml mg protein-1, was found in s.r. from rabbit m. masseter. The inhibition constant of s.r. carbonic anhydrase towards acetazolamide was 4-6 x 10-8 M and similar but not identical to that of cytosolic carbonic anhydrase II.4. It appears possible that the carbonic anhydrase II-like enzyme previously found by us in muscle homogenates (Siffert & Gros, 1982) originates from the s.r.5. Histochemical studies using the dansylsuphonamide method described previously (Dermietzel, Leibstein, Siffert, Zamboglou & Gros, 1985) showed an intracellular pattern of carbonic anhydrase staining compatible with the presence of the enzyme in s.r.: spots homogeneously distributed across the fibre crosssections in transversely sectioned fibres and thin, longitudinally oriented, bands in longitudinally sectioned fibres.6. It is estimated that s.r. carbonic anhydrase accelerates C02 hydration within the s.r. approximately 1000-fold. Thus, CO2 and HCO3-react fast enough to provide a rapid source and sink for protons leaving and entering the s.r. in exchange for Ca2+.
A series of GTP and GDP analogues modified in the terminal phosphate has been synthesized and their activities were investigated in elongation factor G dependent reactions. All of the analogues, with the exception of guanosine 5'-O-(3-thiotriphosphate), were not hydrolyzed by EF-G and ribosomes, but were competitive inhibitors of the ribosome-dependent EF-G GTPase. The most active inhibitors were P3-fluoro P1-5'-guanosine triphosphate and P3-methyl P1-5'-guanosine triphosphate with a Ki of 1.0 X 10(-6) and 2.5 X 10(-6) M, respectively. The activity of the GTP alkyl ester derivatives decreased with increasing number of carbon atoms in the side chain. GTP analogues were much more effective inhibitors than the corresponding GDP derivatives. This points out the necessity of the presence of at least three negative charges in the phosphate chain of the nucleotide for an effective interaction with the active site of the ribosomal EF-G GTPase. Guanosine 5'-O-(3-thiotriphosphate), which was hydrolyzed at one-third the rate of GTP, was able to support poly(U)-directed poly(phenylalanine) polymerization. Possible mechanisms of ribosome-EF-G GTP hydrolysis that arise from our results are discussed. Activity of the nucleotide analogues in EF-G-ribosome complex formation compared well with their ability to inhibit ribosome-dependent EF-G GTPase, P3-fluoro P1-5'-guanosine triphosphate and P3-methyl P1-5'-guanosine triphosphate being again the most effective ones. The stabilizing action of fusidic acid on the EF-G-ribosome complex formation induced by the various nucleotides could not be correlated to any of the structural modifications of the substrate. Guanylyl methylene diphosphonate was displaced more readily than GDP from the EF-G-ribosome complex by GTP analogues insensitive to fusidic acid.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.