Nucleotide second messengers, such as cAMP and c-di-GMP, regulate many physiological processes in bacteria, including biofilm formation. There is evidence of cross-talk between pathways mediated by c-di-GMP and those mediated by the cAMP receptor protein (CRP), but the mechanisms are often unclear. Here, we show that cAMP-CRP modulates biofilm maintenance in Shewanella putrefaciens not only via its known effects on gene transcription, but also through direct interaction with a putative c-di-GMP effector on the inner membrane, BpfD. Binding of cAMP-CRP to BpfD enhances the known interaction of BpfD with protease BpfG, which prevents proteolytic processing and release of a cell surface-associated adhesin, BpfA, thus contributing to biofilm maintenance. Our results provide evidence of cross-talk between cAMP and c-di-GMP pathways through direct interaction of their effectors, and indicate that cAMP-CRP can play regulatory roles at the post-translational level.

The emergence of nanozymes provides a potential method for combating multidrug-resistant bacteria resulted from the abuse of antibiotics. However, in nanozyme-catalyzed systems, few studies have addressed the actual hydrogen peroxide (H2O2) level involved in sterilization. Herein, we designed a high-efficiency peroxidase-mimicking nanozyme with surface-enhanced Raman scattering (SERS) property by assembling gold nanoparticles on single-layer Cu2+-C3N4 (AuNP-Cu2+-C3N4). The nanozyme effectively converts the low-active Raman reporter 3,3′,5,5′-tetramethylbenzidine (TMB) into its oxidized form with H2O2, resulting in SERS signal changes, thereby achieving highly sensitive quantification of H2O2 with limit of detection as low as 0.60 μM. More importantly, the nanozyme can specifically catalyze H2O2 into antibacterial hydroxyl radicals. In vitro and in vivo evaluations demonstrate the remarkable antibacterial efficacy of the nanozyme/H2O2 combination against Staphylococcus aureus (up to 99.9%), which could promote wound healing in mice and allow point-of-care monitoring the amount of H2O2 participated in effective sterilization. This study not only displays great potential in combining multiple functionalities of nanomaterials for versatile bioassays but also provides a promising approach to design nanozymes for biomedical and catalytic applications.

The biosynthesis of prodigiosin in the model prodigiosin-producing strain, Serratia sp. ATCC 39006, is significantly influenced by environmental and cellular signals. However, a comprehensive regulatory mechanism for this process has not been well established. In the present study, we demonstrate that organic hydroperoxide activates prodigiosin biosynthesis in an OhrR-dependent manner. Specifically, the MarR-family transcriptional repressor OhrR (Ser39006_RS05455) binds to its operator located far upstream of the promoter region of the prodigiosin biosynthesis operon (319–286 nt upstream of the transcription start site) and negatively regulates the expression of prodigiosin biosynthesis genes. Organic hydroperoxide disassociates the binding between OhrR and its operator, thereby promoting the prodigiosin production. Moreover, OhrR modulates the resistance of Serratia sp. ATCC 39006 to organic hydroperoxide by regulating the transcription of its own gene and the downstream co-transcribed ohr gene. These results demonstrate that OhrR is a pleiotropic repressor that modulates the prodigiosin production and the resistance of Serratia sp. ATCC 39006 to organic hydroperoxide stress. IMPORTANCE Bacteria naturally encounter various environmental and cellular stresses. Organic hydroperoxides generated from the oxidation of polyunsaturated fatty acids are widely distributed and usually cause lethal oxidative stress by damaging cellular components. OhrR is known as a regulator which modulates the resistance of bacteria to organic hydroperoxide stress. In the current study, organic hydroperoxide disassociates OhrR from the promoter of prodigiosin biosynthesis gene cluster, thus promoting transcription of pigA-O genes. In this model, organic hydroperoxide acts as an inducer of prodigiosin synthesis in Serratia sp. ATCC 39006. These results improve our understanding of the regulatory network of prodigiosin synthesis and serve as an example for identifying the cross-talk between the stress responses and the regulation of secondary metabolism.

This study focused on the application of a microbial biosurfactant as a synergist of the foliar fertilizer. A biosurfactant‐producing Bacillus velezensis MMB‐51 was firstly isolated, which produced the peak yield of 2.287 g/L biosurfactant BS‐51 at the optimum fermentation condition. The chemical nature of BS‐51 was identified as lipopeptide consisting of surfactin and fengycin, which exhibited a low CMC of 11.0 mg/L in ddH2O and a good stability in wide ranges of temperature, pH and NaCl concentration. The BS‐51 was then applied as a synergist of three common sweet potato leaf fertilizers. The result showed that BS‐51 increased the contact area of fertilizer with leaf surface by 51%–93% and the moving speed of fertilizer on the inclined leaf surface by 272%–459%, indicating that BS‐51 decreased the surface tension of three‐leaf fertilizers. BS‐51 also increased the fertilizer residue after it slipped from the inclined leaf surface from 18.5%–21.5% to 29.4–31.2% depending on their types, thereby improving the utilization efficiency of foliar fertilizer. In addition, B. velezensis MMB‐51 secretion inhibited the growth of sweet potato pathogen Ceratocystis fimbriata. Therefore, B. velezensis MMB‐51 could act as an efficient synergist of crop foliar fertilizer with antifungal activity.

Bacterial consortium is an important source of lignocellulolytic strains, but it is still a challenge to distinguish the direct decomposers of lignocellulose from other bacteria in such a complex community. This study aims at addressing this issue by focusing on the dynamic changes in community structure and degradation activity of MMBC-1, an established and stable lignocellulolytic bacterial consortium, during its subculturing revival. MMBC-1 was cryopreserved with glycerol as a protective agent and then inoculated for revival. Its enzyme activities for degradation recovered to the maximum level after two rounds of subculturing. Correspondingly, the cellulose and hemicellulose in lignocellulosic carbon source were gradually decomposed during the revival. Meanwhile, the initial dominant bacteria represented by genus Clostridium were replaced by the bacteria belonging to Lachnospira, Enterococcus, Bacillus, Haloimpatiens genera and family Lachnospiraceae. However, only three high-abundance (> 1%) operational taxonomic units (OTUs) (Lachnospira, Enterococcus and Haloimpatiens genera) were suggested to directly engage in lignocellulose degradation according to correlation analysis. By comparison, many low-abundance OTUs, such as the ones belonging to Flavonifractor and Anaerotruncus genera, may play an important role in degradation. These findings showed the dramatic changes in community structure that occurred during the subculturing revival, and paved the way for the discovery of direct decomposers in a stable consortium. Graphical Abstract