SummaryAutophagy is a major and conserved pathway for delivering and recycling unwanted proteins or damaged organelles to be degraded in the vacuoles. AuTophaGy‐related (ATG) protein 18a has been established as one of the essential components for autophagy occurrence in Arabidopsis thaliana. We previously cloned the ATG18a homolog from Malus domestica (MdATG18a) and monitored its responsiveness to various abiotic stresses at the transcriptional level. However, it is still unclear what its function is under abiotic stress in apple. Here, we found that heterologous expression of MdATG18a in tomato plants markedly enhanced their tolerance to drought. Overexpression (OE) of that gene in apple plants improved their drought tolerance as well. Under drought conditions, the photosynthesis rate and antioxidant capacity were significantly elevated in OE lines when compared with the untransformed wild type (WT). Transcript levels of other important apple ATG genes were more strongly up‐regulated in transgenic MdATG18a OE lines than in the WT. The percentage of insoluble protein in proportion to total protein was lower and less oxidized protein accumulated in the OE lines than in the WT under drought stress. This was probably due to more autophagosomes being formed in the former. These results demonstrate that overexpression of MdATG18a in apple plants enhances their tolerance to drought stress, probably because of greater autophagosome production and a higher frequency of autophagy. Those processes help degrade protein aggregation and limit the oxidation damage, thereby suggesting that autophagy plays important roles in the drought response.

Abstract.The current understanding of the responses of soil respiration (Rs) to soil temperature (Ts) and soil moisture is limited for desert ecosystems. Soil CO 2 efflux from a desert shrub ecosystem was measured continuously with automated chambers in Ningxia, northwest China, from June to October 2012. The diurnal responses of Rs to Ts were affected by soil moisture. The diel variation in Rs was strongly related to Ts at 10 cm depth under moderate and high volumetric soil water content (VWC), unlike under low VWC. Ts typically lagged Rs by 3-4 h. However, the lag time varied in relation to VWC, showing increased lag times under low VWC. Over the seasonal cycle, daily mean Rs was correlated positively with Ts, if VWC was higher than 0.08 m 3 m −3 . Under lower VWC, it became decoupled from Ts. The annual temperature sensitivity of Rs (Q 10 ) was 1.5. The short-term sensitivity of Rs to Ts varied significantly over the seasonal cycle, and correlated negatively with Ts and positively with VWC. Our results highlight the biological causes of diel hysteresis between Rs and Ts, and that the response of Rs to soil moisture may result in negative feedback to climate warming in desert ecosystems. Thus, global carbon cycle models should account the interactive effects of Ts and VWC on Rs in desert ecosystems.

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Nitrogen (N) availability is an essential factor for plant growth. Recycling and remobilization of N have strong impacts on crop yield and quality under N deficiency. Autophagy is a critical nutrient-recycling process that facilitates remobilization under starvation. We previously showed that an important AuTophaGy (ATG) protein from apple, MdATG18a, has a positive role in drought tolerance. In this study, we explored its biological role in response to low-N. Overexpression of MdATG18a in both Arabidopsis and apple improved tolerance to N-depletion and caused a greater accumulation of anthocyanin. The increased anthocyanin concentration in transgenic apple was possibly due to up-regulating flavonoid biosynthetic and regulatory genes (MdCHI, MdCHS, MdANS, MdPAL, MdUFGT, and MdMYB1) and higher soluble sugars concentration. MdATG18a overexpression enhanced starch degradation with up-regulating amylase gene (MdAM1) and up-regulated sugar metabolism related genes (MdSS1, MdHXKs, MdFK1, and MdNINVs). Furthermore, MdATG18a functioned in nitrate uptake and assimilation by up-regulating nitrate reductase MdNIA2 and 3 high-affinity nitrate transporters MdNRT2.1/2.4/2.5. MdATG18a overexpression also elevated other important MdATG genes expression and autophagosomes formation under N-depletion, which play key contributions to above changes. Together, these results demonstrate that overexpression of MdATG18a enhances tolerance to N-deficiencies and plays positive roles in anthocyanin biosynthesis through greater autophagic activity.

Recent years have seen a growing body of evidence showing that plant competition and facilitation usually operate simultaneously to drive population dynamics, community structure and ecosystem functions. However, the potential role of facilitation in spatial patterning of plant populations has rarely been explicitly examined. We used a ‘zone‐of‐influence’ model to explore how facilitation interacts with competition and abiotic stress to determine the spatial patterning of populations during density‐dependent mortality. Model simulations revealed that started with the same clustered pattern, the final pattern of simulated populations depended strongly on the interaction among facilitation, stress level and size‐symmetry of competition. Asymmetric competition consistently led to immediate and non‐random mortality towards regularity, thus rapidly decayed the initially clustered pattern to final patterns of small‐scale regularity and large‐scale randomness. The role of symmetric competition in decaying the clustered pattern increased with abiotic stress because stress‐induced reductions in plants’ growth rates can make individuals in high‐density clusters more likely to die even from symmetric competition. Facilitation played a clear role in counteracting the effect of stress, thus tended to maintain the degree of clustering of the pattern during density‐dependent mortality. This is because the amelioration of harsh conditions by neighboring plants relieved the reductions in plant growth due to competition, thus slowed down and reduced the mortality inside clusters (relative to that outside clusters). Moreover, the effect of facilitation appeared to increase with abiotic stress. Our results indicate that facilitation among neighboring plants should partially be responsible for clustered population spatial patterns observed in stressful environments, even though its contribution relative to other factors (e.g. local dispersal and environmental heterogeneity) remains to be evaluated. In addition, the potential influence of facilitation on self‐thinning trajectory should be explicitly examined in future modeling and experimental studies considering its effects on density‐dependent mortality.