Lipids represent a large family of compounds with highly diverse structures that are involved in complex biological processes. A photocatalytic technique of on-tissue epoxidation of C=C double bonds has been developed for in situ mass spectrometric identification and spatial imaging of positional isomers of lipids. It is based on the plasmonic hot-electron transfer from irradiated gold nanowires to redox-active organic matrix compounds that undergo bond cleavages and generate hydroxyl radicals in nanoseconds. Intermediate radical anions and negative fragment ions have been unambiguously identified. Under the irradiation of a pulsed laser of the third harmonic of Nd3+:YAG (355 nm), the hydroxyl radical-driven epoxidation of unsaturated lipids with different numbers of C=C bonds can be completed in nanoseconds with high yields of up to 95%. Locations of C=C bonds were recognized with diagnostic fragment ions that were produced by either collision with an inert gas or auto-fragmentation resulting from the impact of energetic hot electrons and vibrational excitation. This technique has been applied to the analysis of breast cancer tissues of mice models without extensive sample processes. It was experimentally demonstrated that C=C bonds may be formed at different positions of not only regular mono- or poly-unsaturated fatty acids but also other odd-numbered long-chain fatty acids.
Bromodomain (BRD) is an evolutionarily conserved protein–protein interaction module that is critical in gene regulation, cellular homeostasis, and epigenetics. This study aimed to conduct an identification, evolution, and expression analysis of the BRD gene family in the swamp buffalo (Bubalus bubalis). A total of 101 BRD protein sequences deduced from 22 BRD genes were found in the buffalo genome. The BRD proteins were classified into six groups based on phylogenetic relationships, conserved motifs, and conserved domains. The BRD genes were irregularly distributed in 13 chromosomes. Collinearity analysis revealed 20 BRD gene pairs that had remarkable homologous relationships between the buffalo and cattle, although no tandem or segmental duplication event was found in the buffalo BRD genes. Comparative transcriptomics using a 10x sequencing platform analysis showed that 22 BRD genes were identified in the Sertoli cells (SCs) at different developmental stages of buffalo. Further, the mRNA expression levels of bromodomain and the extraterminal (BET) family in SCs at the pubertal stage were higher than that at the prepubertal stage of buffalo. However, the SMARCA2, PHIP, BRD9, and TAF1 genes exhibited the opposite trend. The maturation process of SCs may be regulated by the BRD family members expressed differentially in SCs at different developmental stages of buffalo. In summary, our findings provide an understanding of the evolutionary, structural, and functional properties of the buffalo BRD family members, and further characterize the function of the BRD family in the maturation of SCs. It also provides a theoretical basis for further understanding in the future of the mechanism of SCs regulating spermatogenesis.
Compost produced by straw and livestock and poultry manure under the action of micro-organisms is one of the main forms of organic alternative fertilizers at present. The present study explored the effects of compost substitution on soil greenhouse gas emissions, soil microbial community changes, and wheat yield to determine the best substitution ratio for reducing greenhouse gas emissions and soil microbial community changes and increasing wheat yield. Using the single-factor randomized block trial design, four treatments were employed, the characteristics of greenhouse gas emission, yield and yield components, and the changes of soil microbial community under different compost substitution ratio in the whole wheat growing season were determined by static box-gas chromatography. During the wheat season, both CO2 and N2O emissions were reduced, whereas CH4 emission was increased. That all treatments reduced the Global Warming Potential (GWP) and Greenhouse gas emission intensity (GHGI) in wheat season compared with T0. Compost substitution can alleviate the global warming potential to some extent. Under the condition of compost substitution, the wheat yield under T2 and T3 increased significantly compared with that under the control; however, the spike number and 1000-grain weight did not differ significantly among the treatments. When compost replacement was 30%, the yield was the highest. Under different ratios of compost substitution, the microbial communities mainly comprised Proteobacteria, Actinobacteria, Firmicutes, Patescibacteria, Chloroflexi, Acidobacteria, Bacteroidetes, Gemmatimonadetes, and Verrucomicrobia. The soil microbial community structure differed mainly due to the difference in the compost substitution ratio and was clustered into different groups. In conclusion, to achieve high wheat yield and low greenhouse gas emissions, compost replacement of 30% is the most reasonable means for soil improvement and fertilization.
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