Phenotyping plays an important role in crop science research; the accurate and rapid acquisition of phenotypic information of plants or cells in different environments is helpful for exploring the inheritance and expression patterns of the genome to determine the association of genomic and phenotypic information to increase the crop yield. Traditional methods for acquiring crop traits, such as plant height, leaf color, leaf area index (LAI), chlorophyll content, biomass and yield, rely on manual sampling, which is time-consuming and laborious. Unmanned aerial vehicle remote sensing platforms (UAV-RSPs) equipped with different sensors have recently become an important approach for fast and non-destructive high throughput phenotyping and have the advantage of flexible and convenient operation, on-demand access to data and high spatial resolution. UAV-RSPs are a powerful tool for studying phenomics and genomics. As the methods and applications for field phenotyping using UAVs to users who willing to derive phenotypic parameters from large fields and tests with the minimum effort on field work and getting highly reliable results are necessary, the current status and perspectives on the topic of UAV-RSPs for field-based phenotyping were reviewed based on the literature survey of crop phenotyping using UAV-RSPs in the Web of Science™ Core Collection database and cases study by NERCITA. The reference for the selection of UAV platforms and remote sensing sensors, the commonly adopted methods and typical applications for analyzing phenotypic traits by UAV-RSPs, and the challenge for crop phenotyping by UAV-RSPs were considered. The review can provide theoretical and technical support to promote the applications of UAV-RSPs for crop phenotyping.
a b s t r a c tTo predict regional-scale winter wheat yield, we developed a crop model and data assimilation framework that assimilated leaf area index (LAI) derived from Landsat TM and MODIS data into the WOFOST crop growth model. We measured LAI during seven phenological phases in two agricultural cities in China's Hebei Province. To reduce cloud contamination, we applied Savitzky-Golay (S-G) filtering to the MODIS LAI products to obtain a filtered LAI. We then regressed field-measured LAI on Landsat TM vegetation indices to derive multi-temporal TM LAIs. We developed a nonlinear method to adjust LAI by accounting for the scale mismatch between the remotely sensed data and the model's state variables. The TM LAI and scale-adjusted LAI datasets were assimilated into the WOFOST model to allow evaluation of the yield estimation accuracy. We constructed a four-dimensional variational data assimilation (4DVar) cost function to account for the observations and model errors during key phenological stages. We used the shuffled complex evolution-University of Arizona algorithm to minimize the 4DVar cost function between the remotely sensed and modeled LAI and to optimize two important WOFOST parameters. Finally, we simulated winter wheat yield in a 1-km grid for cells with at least 50% of their area occupied by winter wheat using the optimized WOFOST, and aggregated the results at a regional scale. The scale adjustment substantially improved the accuracy of regional wheat yield predictions (R 2 = 0.48; RMSE = 151.92 kg ha −1 ) compared with the unassimilated results (R 2 = 0.23; RMSE = 373.6 kg ha −1 ) and the TM LAI results (R 2 = 0.27; RMSE = 191.6 kg ha −1 ). Thus, the assimilation performance depends strongly on the LAI retrieval accuracy and the scaling correction. Our research provides a scheme to employ remotely sensed data, ground-measured data, and a crop growth model to improve regional crop yield estimates.
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