A guide to performing systematic literature reviews in bioinformatics

Mariano, Diego; Carmelina, Leite,; Santos, Lucianna Helene; Rocha, Rafael E. O.; Melo‐Minardi, Raquel Cardoso de

doi:10.48550/arxiv.1707.05813

Cited by 9 publications

(15 citation statements)

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“…For SLR implication, the researcher can collect literature information purposefully that induces to conduct methodological analysis without or with very less biasness. The main thrust of SLR is the formulation of a general view regarding the specific research question and giving it a literature summary (Mariano et al, 2017).…”

Section: Methodsmentioning

confidence: 99%

Ethnography: A Systematic Literature Review of Social Science Publications in Pakistan

Irshad

Chaudhry

Ali

2021

pjsr

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This research study has a mission to highlight the nature of the ethnographic research method, how it came into existence, its purpose of it, what type of tools it uses, what are its limitations, and what significance it induces in Pakistan’s research. Ethnography is also defined as the manifestation of writing a textual context after the conduction of a long, complex process. Ethnographic viewpoints are established depending upon the way of work is conducted. It leads the ethnographer to enter the world every day. It encourages extracting the information about a community under study in cultural contexts. Ethnographic study goals can be accomplished within the standard time of a year which is a minimum requirement. As per the research criteria, it can also take more than a year. However, it is also true that sometimes due to more specific and focused research it takes very little time as compared to the standard time to cover the whole culture of the community of interest. This research paper is based on the SLR methodology. A total of 100 of the articles were identified and retrieved from one of the databases HEC National Digital Library. After identification, 05 research articles were evaluated for data synthesis. For SLR implication, the researcher has collected literature information purposefully that induces to conduct methodological analysis without or with very less biasness. The main thrust of SLR was the formulation of a general view regarding the specific research question of the current study and giving it a literature summary. Application of SLR methodology is found significant to employ in development-planning research in Pakistan based on Ethnography. KEYWORDS Ethnographic research method, Culture Study, Emic and Etic perspectives, Ethnography classification.

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Section: Methodsmentioning

confidence: 99%

Ethnography: A Systematic Literature Review of Social Science Publications in Pakistan

Irshad

Chaudhry

Ali

2021

pjsr

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“…These phases are depicted in Figure 1. The process is based on the iterative Bioinformatic and Systematic Literature Review (BiSLR) spiral model developed by Mariano et al [15]. The differences compared to the iterative BiSLR spiral model are explained below.…”

Section: Review Methodologymentioning

confidence: 99%

“…The iterative BiSLR spiral model starts with a protocol definition phase. In this phase, main and specific research questions, research objectives, and inclusion and exclusion criteria are defined [15]. We omit the definition of main and specific research questions.…”

Section: Review Methodologymentioning

confidence: 99%

“…Inclusion and exclusion criteria are defined in a later paper filter phase. During the reference collection phase, the iterative BiSLR spiral model suggests to select scientific databases, develop and evaluate search keywords, and iteratively repeat the phase with different scientific databases and search keywords in case the research objectives cannot be reached [15]. We initially performed a rigurous reference collection, i.e., the search phase.…”

Section: Review Methodologymentioning

confidence: 99%

“…In the data evaluation phase, the iterative BiSLR spiral model performs title, abstract, diagonal, and full-text reading to determine if papers should be included in the list of papers used for data collection. The iterative BiSLR spiral model finishes with data collection and narrative synthesis [15]. We used title, abstract, and diagonal reading for, and collected data during, the explorative paper classification phase and used fulltext reading, collected data, and performed narrative synthesis during the application pipeline building block definition phase.…”

Section: Review Methodologymentioning

confidence: 99%

See 2 more Smart Citations

Millimeter Wave Sensing: A Review of Application Pipelines and Building Blocks

Berlo¹,

Elkelany²,

Özçelebi³

et al. 2020

Preprint

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The increasing bandwidth requirement of new wireless applications has lead to standardization of the millimeter wave spectrum for high-speed wireless communication. The millimeter wave spectrum is part of 5G and covers frequencies between 30 and 300 GHz corresponding to wavelengths ranging from 10 to 1 mm. Although millimeter wave is often considered as a communication medium, it has also proved to be an excellent 'sensor', thanks to its narrow beams, operation across a wide bandwidth, and interaction with atmospheric constituents. In this paper, which is to the best of our knowledge the first review that completely covers millimeter wave sensing application pipelines, we provide a comprehensive overview and analysis of different basic application pipeline building blocks, including hardware, algorithms, analytical models, and model evaluation techniques. The review also provides a taxonomy that highlights different millimeter wave sensing application domains. By performing a thorough analysis, complying with the systematic literature review methodology and reviewing 165 papers, we not only extend previous investigations focused only on communication aspects of the millimeter wave technology and using millimeter wave technology for active imaging, but also highlight scientific and technological challenges and trends, and provide a future perspective for applications of millimeter wave as a sensing technology.

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Aspects of contextual architecture regarding traditional/contemporary architecture, physical/cultural and place identity: a systematic literature review

Al-Hammadi

Grchev²

2022

OHI

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PurposeAdopting Mapping Literature, the purpose of this study is to notice the tendency in defining contextualism through extrinsic aspects neglecting the intrinsic ones generating three theoretical gaps in understanding contextualism, especially in terms of (1) physical/cultural aspects (P/C); (2) traditional vs contemporary architecture (T/C); and (3) place identity (PI).Design/methodology/approachA directed systematic literature review (SLR) was conducted to investigate the Web of Science and Google Scholar engines for the related studies, resulting in 66 texts of book chapters, conferences, articles and practitioners’ texts. Using the PRISMA reporting method, the study presented the SLR procedure that narrowed the related studies to 66 texts of book chapters, conferences, articles and practitioners’ texts. Both consensus and debates in understanding the relation between contextualism and (T/C, P/C and PI) were re-visited (see Appendix).FindingsAccording to the findings, the studies tend to address contextualism through either extrinsic or intrinsic values. The undefined balance between extrinsic and intrinsic aspects in understanding and creating contextual architecture seems to be the common reason why the three theoretical gaps exist.Originality/valueThis paper did not only conduct an SLR investigation on the topic, which is limited in the field, but it also highlighted the need for further and constant discussions despite the previous one to improve the understanding of contextual architecture.

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A guide to performing systematic literature reviews in bioinformatics

Cited by 9 publications

References 0 publications

Ethnography: A Systematic Literature Review of Social Science Publications in Pakistan

Ethnography: A Systematic Literature Review of Social Science Publications in Pakistan

Millimeter Wave Sensing: A Review of Application Pipelines and Building Blocks

Aspects of contextual architecture regarding traditional/contemporary architecture, physical/cultural and place identity: a systematic literature review

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