The aim of this study was to investigate the heavy metal effect on enzymatic activity in acidic soil samples during spring, summer, and autumn. The four metal fractions, acid-soluble and exchangeable (F1), reducible (F2), oxidizable (F3), and residual (F4) using BCR method in soil samples, were evaluated. The highest percentage share of zinc and copper was determined in F4 (45.8, 54.9%, respectively) and cadmium in F3 (45.6%). The enzymatic activity in soil was differentiated in seasons. During spring, the significant relationship was noted between F1/zinc/dehydrogenase, during summer F2/cadmium/phosphatase as well as F4/cadmium/dehydrogenase and autumn F3/zinc/dehydrogenase. Fraction F1/zinc/copper influenced phosphatase activity, whereas F3/Zn increased dehydrogenase and F2/Cd protease activity. The results indicate that the heavy metals affected dehydrogenase activity the most.