Sphingobium wenxiniae JZ-1 utilizes a wide range of pyrethroids and their metabolic product, 3-phenoxybenzoate, as sources of carbon and energy. A mutant JZ-1 strain, MJZ-1, defective in the degradation of 3-phenoxybenzoate was obtained by successive streaking on LB agar. Comparison of the draft genomes of strains JZ-1 and MJZ-1 revealed that a 29,366-bp DNA fragment containing a putative angular dioxygenase gene cluster (pbaA1A2B) is missing in strain MJZ-1. PbaA1, PbaA2, and PbaB share 65%, 52%, and 10% identity with the corresponding ␣ and  subunits and the ferredoxin component of dioxin dioxygenase from Sphingomonas wittichii RW1, respectively. Complementation of pbaA1A2B in strain MJZ-1 resulted in the active 3-phenoxybenzoate 1=,2=-dioxygenase, but the enzyme activity in Escherichia coli was achieved only through the coexpression of pbaA1A2B and a glutathione reductase (GR)-type reductase gene, pbaC, indicating that the 3-phenoxybenzoate 1=,2=-dioxygenase belongs to a type IV Rieske non-heme iron aromatic ring-hydroxylating oxygenase system consisting of a hetero-oligomeric oxygenase, a [2Fe-2S]-type ferredoxin, and a GR-type reductase. The pbaC gene is not located in the immediate vicinity of pbaA1A2B. 3-Phenoxybenzoate 1=,2=-dioxygenase catalyzes the hydroxylation in the 1= and 2= positions of the benzene moiety of 3-phenoxybenzoate, yielding 3-hydroxybenzoate and catechol. Transcription of pbaA1A2B and pbaC was induced by 3-phenoxybenzoate, but the transcriptional level of pbaC was far less than that of pbaA1A2B, implying the possibility that PbaC may not be the only reductase that can physiologically transfer electrons to PbaA1A2B in strain JZ-1. Some GR-type reductases from other sphingomonad strains could also transfer electrons to PbaA1A2B, suggesting that PbaA1A2B has a low specificity for reductase.
Diaryl ether compounds, such as dibenzo-p-dioxin, diaryl ether, dibenzofuran, and their halogenated derivatives, are important environmental contaminants. The existence of a diaryl ether linkage increases the physical, chemical, and biological stabilities of these compounds and reduces their biodegradability (1). Therefore, their metabolic mechanisms are of great interest. 3-Phenoxybenzoate is an important diaryl ether intermediate in the synthesis of most pyrethriods and is also the metabolic product of their degradation.Microbial metabolism plays a significant role in the dissipation of 3-phenoxybenzoate residues in the environment (2). Until now, two 3-phenoxybenzoate metabolic pathways have been reported. In Pseudomonas pseudoalcaligenes POB310, Pseudomonas sp. strain NSS2, and Micrococcus sp. strain CPN 1, 3-phenoxybenzoate is split into protocatechuate and phenol (3-5), while in Ochrobactrum tritici pyd-1, 3-phenoxybenzoate is first transformed to p-hydroxy-m-phenoxybenzoate and then cleavage of the diaryl ether of p-hydroxy-m-phenoxybenzoate leads to the production of protocatechuate and p-hydroquinone (6). In both pathways, the angular dioxygenation occurs at carbon atoms 1 and 6 of the benzoa...