“…12 HC (n=21 females) IBS (n=32 girls) HC (n=26 girls) MRI -lower GM volume in the thalamus, caudate nucleus, nucleus accumbens, aMCC, and dlPFC relative to controls -reduced functional connectivity between aMCC and precuneus, increased functional connectivity between caudate nucleus and precentral gyrus than controls 133IBS (n=65) HC (n=21) fMRI Reduced association between S1 activation, and increased association between S2 activation, with the gut microbe Lachnispiracea incertae sedis and rectal pain threshold in patients with IBS versus controls -both Clostridium XIVa and Coprococcus demonstrate several indirect associations between visceral sensation and connectivity in subcortical regions in controls, but not patients with IBS 134IBS (n=46) HC (n=60) MRI -increased ReHo in postecentral gyrus relative to controls -increased functional connectivity of the poCC and the insula, precentral cortex, and supplementary motor area -global differences in neural organization; higher clustering coefficient, characteristic path length, and local and global efficiency relative to controls (135) CD (n=54) HC (n=100) MRI -Significantly more patients with CD had cerebral T2 white matter hyper intensities relative to controls; patients with lesions were older than those without (136) CD (n=43, remission) HC (n=37) rs-fMRI -patients with CD displayed disruption and dysfunction in subcortical, sensorimotor, cognitive control, and default-mode neural networks -patients with CD had reduced superior temporal gyrus-precuneus connectivity, supplementary motor area-superior frontal gyrus connectivity, and connectivity between the putamen and insula, superior temporal gyrus, precuneus, supramarginal and aMCC, in addition to reduced connectivity between the aMCC-insula, supplementary motor area, thalamus, and precuneus -Those patients with CD with higher levels of depression and/or anxiety displayed altered topographical patterns associated with the ACC, mPFC, and PCC relative to other patients with CD rs-fMRI -lower ALFF in HPC and paraHPC relative to controls -higher ALFF in PCC, middle frontal gyrus -increased FC between HPC/paraHPC and middle frontal gyrus, ACC, and caudate nucleus relative to controls -increased FC between PCC and MCC and angular gyrus, reduced FC between PCC and inferior occipital gyrus -increased FC between middle frontal gyrus and brainstem, inferior parietal lobe, and superior frontal gyrus relative to controls -working memory test negatively correlated with reduced ALFF of HPC/paraHPC, and increased FC between HPP/paraHPC and caudate nucleus in UC patients -Stroop test RT positively correlated with increased ALFF of PCC, and negatively correlated with increased FC between HPC/paraHPC and ACC in UC patients -alerting effect of attention network task positively correlated with ALLF of PCC, negatively correlated with increased FC between PCC, negatively correlated with increased FC strength between PCC and AUG (? )in UC patients -PSS positively correlated with increased FC strength between PCC and MCC in UC patients -SDS and SAS scores negatively correlated with increased FC strength between MFG and IPL in UC patients (37) CD (n=18, in remission) HC (n=18) sMRI -decreased GM volumes in frontal cortex and anterior midcingulate cortex relative to controls -disease duration negatively correlated with GM volumes in various regions (left precentral gyrus, bilateral middle and superior frontal gyrus, sACC, pMCC, PCC, parahippocampal gyrus, right superior temporal gyrus, left inferior temporal gyrus)…”