Numerous studies have addressed the biological impact of graphenebased materials including graphene oxide (GO), yet few have focused on long-term effects. Here, RNA sequencing is utilized to unearth responses of human lung cells to GO. To this end, the BEAS-2B cell line derived from normal human bronchial epithelium is subjected to repeated, low-dose exposures of GO (1 or 5 µg mL −1 ) for 28 days or to the equivalent, cumulative amount of GO for 48 h. Then, samples are analyzed by using the NovaSeq 6000 sequencing system followed by pathway analysis and gene ontology enrichment analysis of the differentially expressed genes. Significant differences are seen between the low-dose, long-term exposures and the high-dose, short-term exposures. Hence, exposure to GO for 48 h results in mitochondrial dysfunction. In contrast, exposure to GO for 28 days is characterized by engagement of apoptosis pathways with downregulation of genes belonging to the inhibitor of apoptosis protein (IAP) family. Validation experiments confirm that long-term exposure to GO affects the apoptosis threshold in lung cells, accompanied by a loss of IAPs. These studies reveal the sensitivity of RNA-sequencing approaches and show that acute exposure to GO is not a good predictor of the long-term effects of GO.The ORCID identification number(s) for the author(s) of this article can be found under https://doi.www.small-journal.com relationships of graphene-based materials (GBMs). [8] Previous studies have shown that the lateral dimensions as well as the number of layers play important roles in the acute toxicity of GBMs such as graphene oxide (GO). [9][10][11][12][13] However, there are few if any studies in which the long-term impact is examined. Here, we addressed the impact of GO sheets with varying lateral dimensions on human lung cells by applying RNA sequencing coupled with computational analysis of the transcriptomics data. Specifically, we asked whether transcriptomics approaches could be used to distinguish short-term and long-term exposures to GO and if so, which biological processes were involved. We then applied cell-based assays in order to validate the results.
www.small-journal.comSmall 2020, 16, 1907686 Figure 8. Long-term exposure to GO affects the susceptibility of lung cells to apoptosis. To validate the RNA-sequencing-based prediction regarding apoptosis, we exposed BEAS-2B cells to GO-US, GO-S, and GO-L twice weekly for 28 days at 1 and 5 µg mL −1 , and harvested cells at weekly intervals A-D) for analysis using the DNA content assay. Untreated control cells maintained in culture under the same conditions were included for comparison. The results showed a dose-and time-dependent increase of apoptosis following low-dose exposure to GO while control cells were unaffected. 12 of 15) www.advancedsciencenews.com
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