An ambient desorption/ionization (ADI) source, known as the flowing atmospheric pressure afterglow (FAPA), has been coupled to a Mattauch-Herzog mass spectrograph (MHMS) equipped with a focal plane camera (FPC) array detector. The FAPA ionization source enables direct mass spectral analysis of solids, liquids, and gases through either positive or negative ionization modes. In either case, spectra are generally simple with dominant peaks being the molecular ions or protonated molecular ions. Use of the FAPA source with the MHMS allows the FPC detector to be characterized for the determination of molecular species, whereas previously only atomic mass spectrometry (MS) has been demonstrated. Furthermore, the FPC is shown to be sensitive to negative ions without the need to change any detector parameters. The FAPA ionization source consists of a glow discharge in helium using a pin-to-plate configuration. A hole at the center of the plate electrode enables the flow of helium ions and metastables (He*) from the discharge cell into the open atmosphere. These energetic species ionize atmospheric constituents, including water, oxygen, and nitrogen, which in turn can ionize, through chemical ionization [1], analytes from samples placed in the afterglow region. As with other ambient desorption/ionization (ADI) sources, solids, liquids, or gases can be analyzed with the FAPA source, and spectra are generally very simple [1][2][3]. Additionally, positive and negative ions can be generated with the ionization source.The FPC utilizes a linear arrangement of hundreds of Faraday strips. Traditionally, Faraday-based detectors have been inferior in sensitivity to ion-multiplying devices because of their lack of direct amplification. However, the use of Faraday detectors continued because of the superior precision they offer. With the FPC, high precision is retained while sensitivity is boosted by incorporating electronic amplification within each detection channel. Furthermore, because the Faraday array detector is based exclusively on charged particle collection, the mass-bias effects observed with energybased detectors is not a problem.Previously, the FPC has been used exclusively for atomic mass spectrometry [4 -10]. However, three notable FPC traits make it attractive for molecular analyses. First, as just stated, mass bias should not be problematic with the Faraday-based FPC. Second, since the FPC merely integrates charge, enhanced sensitivity should be observed for analytes that carry multiple charges. This advantage would be most significant through the use of an ESI source, which often generates multiply charged species. A final trait of the FPC is its ability Address reprint requests to Dr.