Magnetic fields as weak as the Earth's can change the yields of radical pair reactions even though the energies involved are orders of magnitude smaller than k B T at room temperature. Proposed as the source of the light-dependent magnetic compass in migratory birds, the radical pair mechanism is thought to operate in cryptochrome flavoproteins in the retina. Here we demonstrate that the primary magnetic field effect on flavin photoreactions can be chemically amplified by slow radical termination reactions under conditions of continuous photoexcitation. The nature and origin of the amplification are revealed by studies of the intermolecular flavin-tryptophan and flavin-ascorbic acid photocycles and the closely related intramolecular flavin-tryptophan radical pair in cryptochrome. Amplification factors of up to 5.6 have been observed for magnetic fields weaker than 1 mT. Substantial chemical amplification could have a significant impact on the viability of a cryptochrome-based magnetic compass sensor.2 Amongst other directional cues, migratory birds use a light-dependent geomagnetic compass for orientation and navigation [1][2][3] . Although the primary detection mechanism is unclear, the evidence currently points to magnetically sensitive photochemical reactions in cryptochrome proteins located in the retina [4][5][6] . Cryptochromes 7 contain the chromophore flavin adenine dinucleotide (FAD), photoexcitation of which can trigger three consecutive intra-protein electron transfers along a conserved triad of tryptophan (Trp) residues to produce a (FAD Trp ) radical pair [8][9][10] . This form of cryptochrome is magnetically sensitive in vitro and possibly also in vivo [11][12][13] . Similar magnetosensitivity is conceivable in other cryptochrome-derived radical pairs in which FAD or its protonated form, FADH , is paired with an ascorbic acid radical 14 or, less plausibly, superoxide, 2 O ·- 15,16 . There appear to be different electron transfer pathways in some cryptochromes 17,18 , but no evidence so far that they give rise to magnetic field effects.The radical pair mechanism is well established as the source of magnetic field effects on chemical reactions 19 . Remarkably, the magnetic interactions of electron spins in organic radicals can result in significant changes in reaction kinetics and product yields even though those interactions are many orders of magnitude weaker than the thermal energy, k B T. The sensitivity to applied magnetic fields derives from the coherent spin dynamics of pairs of radicals formed in spincorrelated states. Several conditions need to be satisfied for a radical pair to be suitable as a geomagnetic compass sensor 5 : (a) the electron spin in at least one of the radicals must interact anisotropically with nuclear spins; (b) the mutual interaction of the two electron spins should be small; (c) the radical pair must react spin-selectively; (d) its lifetime should not be too short; and (e) the electron spin relaxation must be relatively slow. Studies of isolated cry...