Primary insomnia is a major health issue with a bearing on the morbidity, health related quality of life. Pharmacologic treatment for insomnia has been shown to be associated with significant side effects; hence, it is need to search safe and effective remedies from natural sources. Powder of Beejapura (Citrus medica Linn) leaves with honey has been indicated to induce sleep in classical text of Ayurveda. Keeping this in view, open labelled, randomised parallel arm clinical trial was planned to evaluate the efficacy of the leaves powder of Citrus medica Linn. on primary insomnia in comparison to Jatamansi (rhizome of Nardostrachys grandiflora DC). Patients of primary insomnia belonging to age group of 20-70 years were diagnosed on the basis of diagnostic criteria given for insomnia in DSM -IV-TR. Total 66 patients were registered and randomly allocated in two arms, among them, total 62 completed the trials. Statistically, 30.6% overall effect was provided by Beejapura leaves, whereas 55.6% overall effect was provided by Jatamansi rhizome in the signs and symptoms of Primary insomnia. The difference between both therapies was statistically significant (p<0.001) wherein Jatamansi rhizome produced clinically better result in comparison to Beejapura leaves. Data indicates that Beejapura leaves improved only late sleep induction whereas Jatamansi rhizome provided better improvement in terms of late sleep induction and sleep maintenance.