First evidence of the occurrence of <i>Turnip mosaic virus</i> in Ukraine and molecular characterization of its isolate

Shevchenko, Oleksiy; Yasaka, Ryosuke; Tymchyshyn, Olha; Shevchenko, T.; Ohshima, Kazusato

doi:10.1111/jph.12703

Cited by 5 publications

(5 citation statements)

References 41 publications

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“…In Ukraine, TuMV has been detected in Brassica oleracea var. capitata, Raphanus sativus, Sinapis alba, Brassica juncea, Camelina sativa, and Bunias orientalis (Shevchenko et al 2016(Shevchenko et al , 2018 and this study shows for the first time the occurrence of TuMV in A. petiolata. Based on phylogenetic analyses, TuMV-Ap isolate was clustered along with isolates AP017803, P017764, AP017791, and JQ073722 from Iran.…”

Section: Discussionsupporting

confidence: 57%

“…At the same time, Ukrainian isolates LC537585, LC537586, LC537587, LC537588, LC537589, and LC537590 of TuMV fell into distinct clade. Ukrainian isolate UKR9, previously reported in the Kyiv region (Shevchenko et al 2018), have relation to Turkish isolates, while the TuMV-Ap is very closely related to Iranian isolates. UKR9 biologically was classified into BR host type, isolates of which infect both Brassica and Raphanus plants systemically with mosaic symptoms (Nguyen et al 2013).…”

Section: Discussionmentioning

confidence: 70%

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Cucumber mosaic virus and turnip mosaic virus occurrence in garlic mustard in Ukraine

Kyrychenko¹,

Snihur²,

Shevchenko³

et al. 2023

Biol. plant.

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Garlic mustard (Alliaria petiolata) is an herbaceous biennial plant native to Europe. In Ukraine, in addition to becoming a serious invader, garlic mustard can serve as a host to several viruses, which may affect agricultural crops. In view of this, the purpose of the study was to identify the virome of garlic mustard growing in Ukraine. Plant samples collected in Kyiv regions were tested for the presence of cucumber mosaic virus (CMV), turnip mosaic virus (TuMV), turnip yellow mosaic virus (TYMV), watermelon mosaic virus II (WMV), and turnip crinkle virus (TCV) by serological and/or molecular methods. According to the results found in the present study, symptomatic A. petiolata obtained in 2021 were infected with CMV (60%), TuMV (20%), or co-infected with CMV + TuMV (20%). TYMV, WMV II, and TCV were not detected in any of the collected samples. The cDNA fragments encoded the coat protein (CP) gene of CMV and TuMV were sequenced and named as CMV-Ap and TuMV-Ap, respectively. In phylogenetic analysis, the CMV-Ap closely resembled the German isolate MW582807 (Sarracenia sp.), with 99.8% nucleotide identity and belongs to subgroup II of CMV. In the phylogenetic tree, TuMV-Ap clustered with isolates AP017803, AP017764, AP017791, and JQ073722, and represented the highest identity (98.6%) to Iranian isolate IRNTRa9 (AP017803) from Rapistrum rugosum and Turkish isolate TUR49 (AP017872) from Raphanus raphanistrum. The sequences of CMV-Ap and TuMV-Ap were deposited in the GenBank under Accession Numbers MZ540213 and OM799323, respectively. The results obtained in the study indicate the important role of infected garlic mustard as alternative host and natural reservoir of CMV and TuMV from which these economically important viruses can spread to other wild and cultivated plants. This is the first molecular evidence of TuMV infection in A. petiolata from Ukraine.

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Section: Discussionsupporting

confidence: 57%

Section: Discussionmentioning

confidence: 70%

Cucumber mosaic virus and turnip mosaic virus occurrence in garlic mustard in Ukraine

Kyrychenko¹,

Snihur²,

Shevchenko³

et al. 2023

Biol. plant.

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“…were known as early as 1862 in France (Tompkins, 1939). The virus is endemic in temperate and tropical regions and has a very wide geographical distribution in the world (Farzadfar et al, 2009; Kawakubo et al, 2021; Korkmaz, Onder, Tomitaka, & Ohshima, 2007; Korkmaz, Tomitaka, Onder, & Ohshima, 2008; Nguyen, Tran, & Ohshima, 2013; Ohshima et al, 2002; Provvidenti, 1996; Shevchenko, Yasaka, Tymchyshyn, Shevchenko, & Ohshima, 2018; Tomimura et al, 2004; Tomitaka & Ohshima, 2006; Tomitaka, Yamashita, & Ohshima, 2007; Yasaka et al, 2017). The centre of emergence is thought to be located in Mediterranean and Middle East countries (Yasaka et al, 2017).…”

Section: Geographical Distributionmentioning

confidence: 99%

Turnip mosaic virus, a virus for all seasons

Nellist

Ohshima

Ponz

et al. 2022

Annals of Applied Biology

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Turnip mosaic virus (TuMV) is an economically important virus infecting a broad range of arable and vegetable crops and many wild plant species. It is also of particular scientific interest as it has the broadest host range of any of the potyviruses, infects dicotyledonous and monocotyledonous plants, is transmitted by many (>89) aphid species and is the best adapted potyvirus to Arabidopsis thaliana. For these reasons it has been particularly well studied from many angles and is being exploited for biotechnological purposes. This review aims to consolidate the most recent advances in research on TuMV and will form the basis of an updated version on the Association of Applied Biologists (AAB) Description of Plant Viruses for TuMV.

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“…For WSMV, NJ phylogenetic trees were initially calculated from the sequences of all isolates available from the GenBank. However, there were inconsistencies in, and poor bootstrap support for, some lineages in the resulting trees, as found previously for other potyviruses [50][51][52]. Therefore, the trees were recalculated from the partial genomes of 77 isolates using mostly WSMV isolates from group B.…”

Section: Phylogenetic Relationships and Sequence Similaritymentioning

confidence: 99%

Occurrence and Characterization of Wheat Streak Mosaic Virus Found in Mono- and Mixed Infection with High Plains Wheat Mosaic Virus in Winter Wheat in Ukraine

Pozhylov

Snihur

Shevchenko

et al. 2022

Viruses

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Although wheat streak mosaic virus (WSMV) is a well-known pathogen inducing significant crop losses and endangering wheat production worldwide, the recent discovery of High Plains wheat mosaic virus (HPWMoV) in Ukraine raises questions on the co-existence of these two viruses having a similar host range and the same mite vector. Here we report on the screening of winter wheat industrial plantings in several important regions of Ukraine for WSMV and HPWMoV. WSMV was identified in an extremely high number of symptomatic plants (>85%) as compared to HPWMoV detected in 40% of wheat samples. Importantly, the preferred mode of HPWMoV circulation in Ukraine was mixed infection with WSMV (>30%) as opposed to WSMV, which was typically found in monoinfection (60%). Screening wheat varieties for possible virus resistance indicated that all but one were susceptible to WSMV, whereas over 50% of the same varieties were not naturally infected with HPWMoV. Overall, phylogenetic analysis of the collected WSMV and HPWMoV isolates indicated their high identity and similarity to other known isolates of the respective viruses. Here we first characterize WSMV isolates found in winter wheat plants in mono- or mixed infection with HPWMoV, which was recently reported as a typical wheat pathogen in Ukraine.

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First evidence of the occurrence of Turnip mosaic virus in Ukraine and molecular characterization of its isolate

Cited by 5 publications

References 41 publications

Cucumber mosaic virus and turnip mosaic virus occurrence in garlic mustard in Ukraine

Cucumber mosaic virus and turnip mosaic virus occurrence in garlic mustard in Ukraine

Turnip mosaic virus, a virus for all seasons

Occurrence and Characterization of Wheat Streak Mosaic Virus Found in Mono- and Mixed Infection with High Plains Wheat Mosaic Virus in Winter Wheat in Ukraine

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