2021
DOI: 10.1101/2021.10.15.464566
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Functional screen of Inflammatory bowel disease genes reveals key epithelial functions

Abstract: Background: Genetic studies have been tremendously successful in identifying genomic regions associated with a wide variety of phenotypes, although the success of these studies in identifying causal genes, their variants, and their functional impacts have been more limited. Methods: We identified 145 genes from IBD-associated genomic loci having endogenous expression within the intestinal epithelial cell compartment. We evaluated the impact of lentiviral transfer of the open reading frame (ORF) of these IBD … Show more

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Cited by 10 publications
(9 citation statements)
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“…Our study additionally suggested that the TLR4/MAPK/ NF-κB signaling pathway was involved in the regulation of CJ in UC. Existing evidence identifies NFKB1 as a causal gene in the pathogenesis of inflammatory bowel diseases [31]. Inhibition of the TLR4/NF-κB pathway is associated with an alleviative effect on DSS-elicited colitis [32].…”
Section: Discussionmentioning
confidence: 99%
“…Our study additionally suggested that the TLR4/MAPK/ NF-κB signaling pathway was involved in the regulation of CJ in UC. Existing evidence identifies NFKB1 as a causal gene in the pathogenesis of inflammatory bowel diseases [31]. Inhibition of the TLR4/NF-κB pathway is associated with an alleviative effect on DSS-elicited colitis [32].…”
Section: Discussionmentioning
confidence: 99%
“…Several pre-clinical experiments, including the data presented in this contribution, have demonstrated a potential for NCT to exert a HNF4α-mediated benefit on intestinal function. Additionally, HNF4α has a well-documented effect on epithelial cell transcription activity and the related transcriptome (Ntunzwenimana et al, 2021). In patients with ulcerative colitis, HNF4α is significantly downregulated compared to controls, suggesting a role in the disease state (Vancamelbeke et al, 2017).…”
Section: Discussionmentioning
confidence: 99%
“…High-density genotyping, targeted sequencing studies, whole-exome sequencing and whole genome sequencing studies have identified the approximately 20 causal genes. Importantly, these studies have revealed key biological functions in the pathogenesis of IBD, including microbial recognition, autophagy, cytokine signaling, and intestinal epithelial barrier function [28].…”
Section: Inflammatory Bowel Disease (Ibd) Is An Intractable Bowel Dis...mentioning
confidence: 99%