Abstract. In this paper we describe a three-dimensional Isogeometric BEM in the time domain based on the T-spline and Non Uniform Rational B-Splines (NURBS) basis to study the free surface behavior. Traditionally, the Lagrange polynomials have been used to discretize the geometry and the BEMs variables. The Lagrange basis are discontinues across the elements although the physical variables are continuous. In dynamics problems with high mesh distortions this approach can produce numerical instabilities that can be quickly propagated. This problem could be overcome using T-spline or NURB basis. The main advantages of this approach are: (1) the control of the continuity and smoothness of the T-spline and NURBS basis, which makes the model numerically stable without the need of artificial smooth techniques;(2) the high order geometrical approximation by non-rational splines;(3) the refinement capabilities without affecting the geometry and BEM's variables; and (4) the direct integration with computer aid geometrical design tools. We use the concept of the Bézier extraction operation which provides an element point of view of the T-Spline and NURBS similar to the traditional finite element. The boundary integral Equation is solved at each time step by the GMRES algorithm and the time marching scheme is performed with a fourth-order Runge-Kutta method to update the model. Additionally, the hydrodynamic force is calculated by an auxiliary boundary equation. Some numerical benchmark examples are analysed to show the accuracy and the stability of the method 7967 J. Maestre, J. Pallarés and I. Cuesta