The marking of Drosophila suzukii can be an important instrument for studying the ecology and behaviour of this economically important fruit pest, aiding the development of new Integrated Pest Management (IPM) tools or strategies. There is, however, a need for a cost-effective methodology that provides an easily detectable and stable mark. Whereas fluorescent pigment powders are often used in entomological research, the pigments (series, dyes), application techniques, or doses need to be evaluated for each studied species in terms of their efficacy and possible adverse effects on the performance of the insect. The effectiveness of different application techniques and dyes (RadGlo ® TP-series) and their effect on the survival of adult D. suzukii were investigated in the laboratory. Furthermore, the influence of the marking on the behaviour of the flies was examined in laboratory trap assays (olfaction) and a field recapture study (general orientation). The persistence and detectability of the marks was evaluated both on living flies (for different application techniques) and dead flies under trapping/storage conditions. The use of fluorescent powders to mark D. suzukii flies yielded a clearly detectable and highly persistent mark, without any adverse effects on the survival and behaviour of the flies. Insects 2020, 11, 152 2 of 20The spotted wing Drosophila, Drosophila suzukii Matsumura (Diptera: Drosophilidae), native to Asia [5][6][7], has become a worldwide invasive pest of soft-skinned fruit crops over the last decade [8][9][10][11][12][13][14]. Studies on the ecology and behaviour of the species can yield new insights allowing the improvement or development of management strategies. Various methods for marking D. suzukii flies have been proposed and further optimised. An immunomarking technique (i.e., the use of proteins as markers and detection by enzyme-linked immuno-sorbent assays (ELISA) [15]) for both topical application and acquisition of residues on leaves was tested and optimised by Klick et al. in a series of laboratory and semi-field experiments [16]. What makes this technique unique is that vast areas can be sprayed with inexpensive proteins and that detection by ELISA is fairly sensitive to the acquisition of leaf residues. The disadvantages of immunomarking are the possibility of both false positives and false negatives [17], the need for individual analyses of specimens, and the costs and labour required for detection. Trace elements and stable isotopes can be administered to plants to act as systemic markers for herbivorous insects, an approach that was evaluated for D. suzukii with Rb and 15 N. [18]. The added value of these systemic markers lies in the fact that larvae are self-marked while developing inside the host fruits, enabling the linkage of captured adults to their source of larval development [18]. Methods of self-marking are particularly interesting for MC studies in which whole areas or plants are marked, instead of marking the (captured/reared) insects before release. For MR and M...