By monomer‐mediated in‐situ growth synthesis strategy, with hydroquinone and 1,3,5‐tris(4‐aminophenyl)benzene as monomers, a core‐shell magnetic porous organic polymer was synthesized through a simple azo reaction. Based on this, a magnetic solid‐phase extraction–high‐performance liquid chromatography–fluorescence detection method was proposed for the analysis of fluoroquinolones in a honey sample. With ofloxacin, ciprofloxacin, enrofloxacin, lomefloxacin, and difloxacin as target analytes, factors affecting the extraction efficiency had been optimized. The LODs were 1.5–5.4 ng/L (corresponding to 0.23–0.81 μg/kg in honey). The linear range was 0.005–20 μg/L for difloxacin, 0.01–20 μg/L for ofloxacin, ciprofloxacin and lomefloxacin, and 0.02–20 μg/L for enrofloxacin. The enrichment factor was 84.4–91.7‐fold with a high extraction efficiency of 84.4–91.7%. The method was assessed by the analysis of target fluoroquinolones in honey samples, and the recoveries for the spiked samples were 79.3–95.8%. The results indicated that the established magnetic solid‐phase extraction–high‐performance liquid chromatography–fluorescence detection method is efficient for the analysis of trace fluoroquinolones in honey.