Morphological and molecular characterization of underutilized medicinal wild ginger (Zingiber barbatum Wall.) from Myanmar

Wicaksana, Noladhi; Gilani, Syed Amir; Ahmad, Dawood; Kikuchi, Akira; Watanabe, Kazuo

doi:10.1017/s1479262111000840

Cited by 13 publications

(13 citation statements)

References 37 publications

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“…Marka ini telah berhasil mengidentifikasi keragaman pada 51 spesies tanaman yang tergolong ke dalam 28 famili dengan jumlah fragmen yang dihasilkan sebanyak 41-63 (Yamanaka et al 2003). Marka PBA merupakan marka yang sangat informatif dengan nilai polymorfism information content (PIC) dan persen polimorfisme yang tinggi (Wicaksana et al 2011).…”

Section: Pendahuluanunclassified

“…Penggunaan marka PBA sebagai marka fungsional terhadap aksesi kunyit Indonesia menunjukkan nilai polimorfisme tinggi yaitu sebesar 100%. Hal ini sejalan dengan penelitian Wicaksana et al ( 2011) yang menggunakan marka PBA pada Zingiber barbatum Wall. asal Myanmar yang menunjukkan persentase polimorfisme sebesar 92,15%.…”

Section: Analisis Dataunclassified

“…Hal ini sejalan dengan penelitian Ismail et al (2019) pada temulawak yang menunjukkan bahwa tingkat keragaman temulawak berdasarkan marka PBA sangat luas dengan tingkat kemiripan pada rentang 0,00-0,83. Penelitian Wicaksana et al ( 2011) menunjukkan keragaman genetik yang luas pada Zingiber barbatum Wall, berdasarkan analisis marka morfologi dan marka molekuler PBA dengan rentang koefisien kemiripan genetik Jaccard 0,21-0,97. Informasi keragaman genetik yang didapatkan sangat penting untuk dasar strategi konservasi, pemanfaatan, dan kegiatan pemuliaan tanaman (Li et al 2011).…”

Section: Analisis Kekerabatan Dan Keragaman Genetikunclassified

“…Aksesi-aksesi yang berada pada satu subklaster merupakan aksesi yang berasal dari provinsi yang berbeda. Spesies jahe liar yang diteliti oleh Wicaksana et al ( 2011) juga menunjukkan tidak adanya hubungan yang signifikan antara aksesi Zingiber barbatum dengan wilayah asal koleksinya di Myanmar. Hal tersebut dapat terjadi karena plasma nutfah berasal dari daerah yang sama dan ditransfer di dalam maupun ke luar provinsi (Shen et al 2010).…”

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Keragaman Genetik 64 Aksesi Kunyit Asal Indonesia Berdasarkan Marka P450-Based Analogue (Pba)

et al. 2020

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Turmeric is a rhizome producing plant with many utilization such as for consumption, medicine, and colorant industries. The development of superior turmeric varieties in Indonesia needs to be supported by genetic diversity information availability. Despite its potential, genetic diversity information of Indonesian turmeric has not been widely observed. A molecular marker is used to address genetic diversity information with the accurate result due to minimum environmental influences. PBA can detect the P450 gene as a functional marker, which is related to the synthesis of secondary metabolites in a wide genome area. Thus, it can be used as an alternative marker to identify genetic diversity. This research aimed to obtain genetic diversity information of 64 turmeric accessions using eight primer sets of P450-Based Analogue (PBA). The study was conducted in the Central Laboratory of Padjadjaran University from June 2019 to January 2020. Results showed that the full 133 bands were detected with a range of allele number 8 - 45 bands and an average of 22.3 bands per allele. PIC analysis showed six primer sets of PBA had high polymorphisms ranged from 0.90 to 0.98, hence categorized PBA as a highly informative marker. Cluster analysis divided 64 turmeric accessions into two main clusters based on a similarity index ranged from 0.01 to 0.83. The accession of CL-GTL01 origins from Gorontalo had a low similarity coefficient of 0.01 to the other 64 accessions cluster. On the other hand, CL-NTB01 dan CL-PPB01 had the highest similarity index of 0.83. Based on the PIC value, the total number of polymorphic bands, and genetic distance, it can be concluded that local Indonesian turmeric had wide diversity based on PBA marker.

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Section: Pendahuluanunclassified

Section: Analisis Dataunclassified

Section: Analisis Kekerabatan Dan Keragaman Genetikunclassified

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Keragaman Genetik 64 Aksesi Kunyit Asal Indonesia Berdasarkan Marka P450-Based Analogue (Pba)

et al. 2020

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“…Pogostemon cablin (Blanco that extensive vegetative propagation has contributed to declining genetic diversity in Patchouli. In contrast with Zingiber species, they were vegetatively propagated but has a wide range of diversity (Wicaksana, Gilani, Ahmad, Kikuchi, & Watanabe, 2011). It means that strategies to maintain genetic diversity of Patchouli has to be relatively different with another vegetatively propagated plants (e.g., Zingiber barbatum), since species vegetative propagation does not correlated species wide variation.…”

Section: Further Prospects Of Mutational Effects On Patchouli Plantsmentioning

confidence: 99%

Genetic and Leaf Characteristic Diversity on 10 Mutant Progenies of Patchouli (Pogostemon cablin) Provide Insights to Selection Strategies

Tahir¹,

Riniarti²,

Ersan³

et al. 2019

Agrivita.J.Agr.Sci

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The importance of patchouli plants to produce essential oil has established this medicinal herb as one of the Indonesia's main economic contributor. To date, Indonesia can only provide 5 varieties i.e. Sidikalang, Tapak Tuan, Lhokseumawe, Patchoulina 1 and Patchoulina 2. In order to increase national patchouli production, several efforts needs to be done by providing new superior patchouli lines. This experiment was undertaken to reveal diversity of mutant progenies derived from gamma ray irradiation in patchouli. Six SSR primers were used to determine genetic diversity on MV3 generation of the mutants. Molecular analysis revealed a moderate to high polymorphism based on tested primers, which amplified 73 bands, and resulting of 0.705 PIC value. Dendrogram analysis based on Euclidean dissimilarity showed broad diversity that ranged from 0.23 to 0.82. Phenotypic tree gave clear separation that all mutant clones were clustered into three different group, with Eucledian dissimilarity coefficient ranging from 0.02 to 0.13. This report indicates that Patchouli vegetativelypropagated mutants were able to maintain their variability continuously from their parental lines (M0). Furthermore, our findings offer comprehensive information on breeding strategies of patchouli plants, giving an opportunity to assess important traits at early generation.

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Molecular Markers: Potential Facilitators in Plant Breeding and Germplasm Conservation

Igwe

2021

Food Security and Safety

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Morphological and molecular characterization of underutilized medicinal wild ginger (Zingiber barbatum Wall.) from Myanmar

Cited by 13 publications

References 37 publications

Keragaman Genetik 64 Aksesi Kunyit Asal Indonesia Berdasarkan Marka P450-Based Analogue (Pba)

Keragaman Genetik 64 Aksesi Kunyit Asal Indonesia Berdasarkan Marka P450-Based Analogue (Pba)

Genetic and Leaf Characteristic Diversity on 10 Mutant Progenies of Patchouli (Pogostemon cablin) Provide Insights to Selection Strategies

Molecular Markers: Potential Facilitators in Plant Breeding and Germplasm Conservation

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