CPA4 (carboxypeptidase A4) is a member of the metallocarboxypeptidase family. CPA4 was originally found in a screen of mRNAs up-regulated by sodium butyrate-induced differentiation of cancer cells. Further studies suggested a relation between CPA4 and prostate cancer aggressiveness. In the present study, we determined that CPA4 is secreted from cells as a soluble proenzyme (pro-CPA4) that can be activated by endoproteases, such as trypsin. Three complementary approaches were used to study the substrate specificity of CPA4; kinetic analysis was performed using a new series of chromogenic substrates and some biologically relevant peptides, the cleavage of synthetic peptides was tested individually, and the cleavage of a mixture of >100 mouse brain peptides was examined using a quantitative peptidomics mass spectrometry-based approach. CPA4 was able to cleave hydrophobic C-terminal residues with a preference for Phe, Leu, Ile, Met, Tyr, and Val. However, not all peptides with C-terminal hydrophobic residues were cleaved, indicating the importance of additional residues within the peptide. Aliphatic, aromatic, and basic residues in the P1 position have a positive influence on the cleavage specificity. In contrast, acidic residues, Pro, and Gly have a negative influence in the P1 position. Some of the peptides identified as CPA4 substrates (such as neurotensin, granins, and opioid peptides) have been previously shown to function in cell proliferation and differentiation, potentially explaining the link between CPA4 and cancer aggressiveness. Taken together, these studies suggest that CPA4 functions in neuropeptide processing and regulation in the extracellular environment.
Carboxypeptidases (CPs)3 hydrolyze a single amino acid from the C terminus of peptides and proteins. Metallo-CPs use a catalytic mechanism in which nucleophilic attack on a peptide bond is mediated by a Zn 2ϩ -activated water molecule (1). Most metallo-CPs are classified based on amino acid sequence, structure, and function into subfamilies within clan MC, family M14 (2). These subfamilies include M14A, also known as the CPA/ CPB subfamily; M14B, also known as the CPN/CPE subfamily; M14C, which includes ␥-D-glutamyl-(L)-meso-diaminopimelate peptidase I from Bacillus sphaericus; and a proposed fourth subfamily, including cytosolic CPs (3, 4). Metallo-CPs have also been divided into subgroups based on substrate specificity: A-like enzymes with preference for hydrophobic C-terminal amino acids; B-like enzymes, which cleave C-terminal basic residues; CPs with preference for glutamate in the C-terminal position; and CPs with a broad substrate specificity.CPA4 (carboxypeptidase A4) belongs to the M14A subfamily of carboxypeptidases. The pancreatic members of this subfamily (CPA1, CPA2, and CPB) act in the degradation of dietary proteins in the digestive tract. Other members of this subfamily display a wide spectrum of physiological roles. Mast cell carboxypeptidase (recently renamed CPA3) is found in the secretory granules of mast cells and plays a role ...